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berkeley_reactor_200306_biofilm_scaffold_113606_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(14468..15118)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 375
  • Evalue 1.80e-101
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 375
  • Evalue 5.20e-102
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01343.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 375
  • Evalue 2.60e-101

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 651
ATGGGAGTTATTAAAGTTGCAATAGCCGATGACCACAAGATATTCCGAAAGGGTGTCATATTATCTCTGCGTCCCTATAATGCTATAAAATTCGTGCAGGAGGCAGAAAATGGGCAGGAATTGTTGGACGGGCTGGCTGCTTCGGAGCCGGATGTGGTGCTCATGGACCTTCGAATGCCTCTCAAAGATGGAATAGAAACTACAAAGATCATTGCTAAACAATATCCCTCCATTCACATTATCGCCCTCACCATGTACGAGGATGAGCGATTTGTCAGCCATATGATGGAAATTGGCGCCAATGGCTATCTTCTTAAAAGCGCAGACCCTTCCGAGATCAAACGTGCCATCATCGAAGTTGCCACAAAGGGCTATTATCTCAATAACTTCGTCAACCGCATCCTGCTGAAAAAATCCCATACCCGCACCAAAGTCATCCCAAGCCTGAACACAGAGATAACCCTAAATGACCGGGAAAGGGAAGTAGTAAGATATATCTGCATGGAATTTACGGCGCAGGAAATAGCGCAAAAGATAGATGTAAGTCCCAGAACTGTTGAAGCGATAAAAGACAGGTTAATGGAACGTTTTGGGGCAAAGAACACCGCAGGTCTGGTGTTTTTCGCTGTAAAGAATAACCTGATCGACTAG
PROTEIN sequence
Length: 217
MGVIKVAIADDHKIFRKGVILSLRPYNAIKFVQEAENGQELLDGLAASEPDVVLMDLRMPLKDGIETTKIIAKQYPSIHIIALTMYEDERFVSHMMEIGANGYLLKSADPSEIKRAIIEVATKGYYLNNFVNRILLKKSHTRTKVIPSLNTEITLNDREREVVRYICMEFTAQEIAQKIDVSPRTVEAIKDRLMERFGAKNTAGLVFFAVKNNLID*