ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_113606_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 22577..23401

Top 3 Functional Annotations

Value Algorithm Source
Aminotransferase class IV n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 283.0
  • Bit_score: 219
  • Evalue 2.80e-54
class IV aminotransferase similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 283.0
  • Bit_score: 219
  • Evalue 7.90e-55
Aminotransferase class IV {ECO:0000313|EMBL:ACU64362.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 283.0
  • Bit_score: 219
  • Evalue 3.90e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 825
GTGAGCAGCTTCATCATCTTTAACGGGTCCGTTGTCCCAGCCAGGACTCCTCTTATTACAGTAGAAAACCGTGGTTTTCGCTATGGTGACGGTCTGTTCGAAACCATCCGGATAAAGGATGGACGAATAGTGATGGGTGAATACCATTTTGAGCGGTTGCTGTCAGGCGCCCGTCTTCTCCAATTTGAAACCAAAGCTATTAATTCTGACAAACTTTCGGCTGAGATCCTGTCGCTTTGCCAGCGAAATGGCCATTTGCCATCTGCCCGGGTGCGGCTGAATGTATTTAGAGGTGATATAGGGGAGCAAGAAAACGTTCCGCACTATGTCATTCAAACATGGGCTTGGACATTGGTCGAGGAGCAAGAAAAAGGGCTGGTTTTGGGTGTCTATCCCAAGGGGCGGAAAAGCTGTGATCAGCTGTCCAACGTAAAATCAAATAATTATTTAATATACTCTATGGCAGCCAGGTATGCTGCCCTGCATGGATGGGATGACTGCCTGGTACTGAACAATGCCGGCCGGGTAGCGGACAGCAGCATTGCCAATCTATTCTGGGTCAGTGGGGGCATTGTTTATACGACGCCATTGACAGAGGGATGTATAGCCGGAGTGATGCGGCGATGGCTAATGACAAATCTGTCGGGATATGGATACGAGGTACAGGAGCGTCCTGTGGCGCCTGAGGACCTGATCCTGGCGGACGAGGCATTTCTTACCAACGCAATACGCGGCGTTCGATGGGTGGGTAACCTGGCCGGGACCACTTATGGCAACAAAATTGCGCGGGCTGTAAAAATGATATTAGATGAAAACCTCTATTAG
PROTEIN sequence
Length: 275
VSSFIIFNGSVVPARTPLITVENRGFRYGDGLFETIRIKDGRIVMGEYHFERLLSGARLLQFETKAINSDKLSAEILSLCQRNGHLPSARVRLNVFRGDIGEQENVPHYVIQTWAWTLVEEQEKGLVLGVYPKGRKSCDQLSNVKSNNYLIYSMAARYAALHGWDDCLVLNNAGRVADSSIANLFWVSGGIVYTTPLTEGCIAGVMRRWLMTNLSGYGYEVQERPVAPEDLILADEAFLTNAIRGVRWVGNLAGTTYGNKIARAVKMILDENLY*