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berkeley_reactor_200306_biofilm_scaffold_113606_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 23385..24698

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribodipyrimidine photo-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 434.0
  • Bit_score: 627
  • Evalue 5.40e-177
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KIC89303.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 434.0
  • Bit_score: 630
  • Evalue 1.50e-177
deoxyribodipyrimidine photo-lyase similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 434.0
  • Bit_score: 627
  • Evalue 1.50e-177

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1314
ATGAAAACCTCTATTAGCGTCTTCTGGTTTCGCCGGGATCTCCGTCTCCATGACAATGCCGGGCTTTATCATGCTTTAAAAGATGGCCATCCCGTCCTACCCATGTTCATCTTTGACAAGGAGATCCTGGACAGGCTGGATGAAAGGGCGGATGCCCGGGTGCAATTTATCCGGGATACGTTAACTGGCATGCAGGAGGAACTGGAAAAGCATAGCTCAGGTCTGGAGGTGTATTATGGTTCACCGGAAAAGGTCTTCGAAGAATTACTGTCCAAATACCAGATATCCAGGGTCTTTGTCAATAACGATTACGAACCCTATGCACGGGAGCGGGATTCTGCTGTTGCCAGGTTATTGCAGAAAGCGGGATGTTCTTTTCACAGTTATAAGGACCAGGTGATATTTGAGAAAGATGAGGTGTTAAAGGATGACGGAACTCCTTATACGGTGTTTACGCCCTATAGCAAACGGTGGAAGGCTACCTTAAATGATTTTTATCTTCGAAGCTACCCCGTGGAAAAATATGCTGCCAATTATTATCAACGCAAACCCGGCAGGATCCCTTCACTTGACTCTATGGGGTTCAAACCTTCAGCTATCTTTATTCCATCATCTGCGGTAAAGAAGAACGTGATAGAAGAATATAAGGATAGGCGGGACTTTCCGGGTATCGAGGGCGGCACTACCCGTATGGGTGTCCATCTCCGTTTTGGCACCGTCAGCATTCGGGAACTGGCCCGTAAGGCGCAGGCGTTAAGTGAGGTGTACCTGGGGGAACTGATCTGGCGGGACTTTTTCCACATGATCCTTTGGCATTTTCCTGCAGTTGGGAAAGGAAAAGCGTTCAGGCCTGCTTACGACCTGATCAAATGGCGCAACAATGAAAAGGAATTTGAACGCTGGTGCCAGGGACAGACGGGCTATCCTATCGTTGATGCGGGTATGCGGGAATTGAACGCGACGGGTTTTATGCATAACAGGGTGCGGATGATCGTGGCTTCTTTCCTGGCCAAACATCTGCTCATCGACTGGCGATGGGGGGAGGCCTATTTTGCGGCAAAGCTGCTGGACTTTGACCTGGCTGCGAATAATGGCAACTGGCAATGGGCGGCGGGCAGCGGTTGCGATGCGGCTCCTTATTTCAGGGTGTTCAATCCATATCTTCAGACGGAGCGGTTCGATCCTGATCTCAAATATATCCGGAAGTGGGTGCCTGAATGGGAGGGTTTCGGTTATCCGGCTCCGATAGTTGAGCATGAGGTTGCCCGAAAGCGGGCCCTGGAAGTATATGCCAGGGCTGTGAAGGAGAGATAG
PROTEIN sequence
Length: 438
MKTSISVFWFRRDLRLHDNAGLYHALKDGHPVLPMFIFDKEILDRLDERADARVQFIRDTLTGMQEELEKHSSGLEVYYGSPEKVFEELLSKYQISRVFVNNDYEPYARERDSAVARLLQKAGCSFHSYKDQVIFEKDEVLKDDGTPYTVFTPYSKRWKATLNDFYLRSYPVEKYAANYYQRKPGRIPSLDSMGFKPSAIFIPSSAVKKNVIEEYKDRRDFPGIEGGTTRMGVHLRFGTVSIRELARKAQALSEVYLGELIWRDFFHMILWHFPAVGKGKAFRPAYDLIKWRNNEKEFERWCQGQTGYPIVDAGMRELNATGFMHNRVRMIVASFLAKHLLIDWRWGEAYFAAKLLDFDLAANNGNWQWAAGSGCDAAPYFRVFNPYLQTERFDPDLKYIRKWVPEWEGFGYPAPIVEHEVARKRALEVYARAVKER*