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berkeley_reactor_200306_biofilm_scaffold_124345_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(12467..15913)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UN92_TANFA similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 1127.0
  • Bit_score: 900
  • Evalue 1.50e-258
TonB-linked outer membrane protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 1127.0
  • Bit_score: 900
  • Evalue 4.20e-259
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AEW20622.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 1127.0
  • Bit_score: 900
  • Evalue 2.10e-258

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Taxonomy

Tannerella forsythia → Tannerella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3447
ATGGATCTTAAGGCTCTTTGTATCATTCCGCCACGGGCGGGATTCACCAAAACTATGCGGATCATGAAAACTACCGCACTCTTTTTATTGGCGGCCTGCCTCCAGGTAAGTGCCCGCGGTTACGCTCAGAAGATCACCATCTCTGAAAAAAATGCTTCTTTGGAGAAGGTATTCAGCCTTATCGAACGCCAGAGCGGATACCAGTTCTGGTATGACCAGCAGCTGCTGGAAGGGGCGGGGTCCGTAGACCTCTCCATCAAAGAAGCAAGCCTGGAGCAGGCTTTGCAGCTGCTCTTCAGGGGCAGGCAGCTGACATACACCATCGTCAGAAAGACCATCGTGGTAAGATCGAGGTCTACGCCATCCCCGGACCCCCAACGCGGGGATACCTCGCAGCTCCCCAACGCCTCCTCAAAGGCAGATCTACATGGCGTAGTATATAATGAAGAAGGGAAACCACTGGCTGGCGCCAGCGTAATGGTAAAAGAGTCAGGGAAAGGGACCGTTACCGATGACAAAGGAGAATTTGAATTGCGGATGGTGGACAGGAATGCTACCATCGTCATCAGCGGTGTAAATATGGAACAGCAGGAGGTCAGGGTCAATGGAAGAACAAACATCGTGGCGACCCTGAAAACCCAGGTCAGCAGCCTGAACGAGACGGTAGTGGTAGGCTATGGGACGCAGAAGAGAGTGTCTCTGCTCGGTGCTGTGTCAACGGTGGGCGCCGCTGATATCATGAAAGGAGCCGGCACGAATTTGTCCCAGGCCATTGTGGGGAAGCTGCCTGGCCTGGTGACCAGGCAGGAGTCTGGCCTCCCCGGCTCGGACCAGGTGAATATCTATGTCCGCGGATTTGGATCTTTAAATAGCAACGCACCACTGGTGCTGGTGGATGGAGTAGAACGTTCCATCAGCAGCCTGGACCCTTCCGAAATTGAGTCGGTCACCATATTGAAAGATGCCGCCTCGGCAGCCGTATATGGTGTAAGAGGAGCCAACGGCGTTATACTGGTTACTACCAAACGGGGCAGGACAGGTCGGCCGGCCTTCACTTATACAGGGTCCTACACCATCAGCCAGAATACCAGGATGCCGGAATACCTCAATGGGCAGGAATTCGTCAAATGGTATAATTATGCCGATGAGATCAATGGCAGAGGCCACACTTTTTCCGATGCGGTGGTGGATAAAGTGACAAAGGGAGATGCGGACGGCATTTATGGAAATACCAACTGGCAGAAGCAGCTGCTGAGATCGGCGCCGGTAATGCAGCACAATATCAGCTTGCGCGGTGGCGATCAGTCTATAAAATACTTTATGTCCCTCGGGTACCTGAACCAACAGGGTATTATCAAAGGAGTCGATTATTCCCGCTACAATATACGGTTGAATGTCGACGCCAATGTGACCAATGACTTCTTCATCGGGCTGAACCTGGGCGGCAATACCGGCAACGCCAACAGTCCCCAGATCTCCAATTTCTCCGGTAATGGCAATTCCGTGACCACCAACCTGATGAACCAGATCATCACTGCCCACCCTTACCTGAACCCCCGGACGCCCGACGGCCTCTATCTCAGCTCCGCCCTGCAGCCTGGCGACAACCCGCTGGCAGCAAGAGACCTGTCCGGCTACAATGACAATGATAATACGGTGCTGCAAAGCAGCCTGACATTACAATACAAGCTGCCCTATGTAAAGGGGCTGTCCTTTAAGGCGGTGGCCAGCTACGATAAGAATTATTACCATACCAAATCCTTTTATACGCCGTATACGCTTTCGACTGTCGACCCCACCCAATCATCCTCCTCTCTTTATGAGACGGCTTCGCCCTATGGCACCATCGCCATGCTGAGCGAAAGCTATACGCAGTCGAATCGCTGGACGCTGCAGGAGTATATCAATTATGACCGGGTCTTCGGCAGGCATACAGTGGGAGCGCTCGTCGTAGCTGAACAATCCGGCTATCATTATACGGGGCTGGGGGCATCCGCCCAGAACTTCGACCTCACCGATCTCAGCGAGTTCGGGTTTGCAAAAGACAACCCTAACAAGCCGTACGGCAGCAGCGGCAATACCAACAGGGCCGGATGGGTCGGAAGAGTAAATTATATGTTCGACAACCGCTACCTGGCCGAATTCTCCGGGCGGCTGGACGCATCCACCAATTTCCCTAAGAATAACAGGTATGGCTTTTTTCCCTCTTTTTCCGCCGGCTGGCGTGTATCGGAGGAGGACTTTTTCAAAGCCCTGCACTCGCCTGTCAGCAATCTGAAGCTGACGGCATCTTATGGGCTCCTGGGCAATGATGCGACAGGCGGTACTTATGAATACCTGCAATACTTCAATCTTTCCACCAGCCCGGTGGCAAATTTCGGCGGCTCGAATGTCAACGGCCTGCTGCCTACCTCTTATCCTAATACGAAACTGACCTGGGAGAGATCCAAAACGTCCAACCTGGGTCTGCAGGTGGAGCTGTGGAAAGGTCTGCTAAGCGCGGAAGCAAATGCATTCTATAAGCTCACCAGCAATATCCTGACCAGCGTTTCCAGTACCTATCCGCCTTCGCTGGGCGGCTATTATCCTACTACCGTCAATTCGGGAAAGGTAGACAACCGTGGGTTCGAGCTGGTGCTCGGGCATAAGAATAAGCTGGGAGAATTCTCCTACACGCTGACCGGCAGCATCAGCTGGGCGCATAACCGTATCCTGAACATGGACCAGTCTGCCGACATACCTGAATACCTGAGCCTGATCGGAAGGTCGATGGGCGCGAAAACAGGATTGGTCGCACAGGGTCTTTTCCAGTCGGATGCGCAGGCCGCAAAATCACCGGTGGTCAGCTCTACCGCAAGAGCAGGCGATATCAGGTATAAGGACATCAATGGCGACGGAAAGATCACCTATGACCAGGATGTCACCATCATTGGACGCAGCAGCTATCCTGAATTGAACTATAGCTTCAACTATGCATCTTCGTGGAAGAAATTCGAATTGTCTTTTTTGGTGCAGGGCACAGCTATCTGTGACAATGCGCTGATGGGATATTATGATGGCATCGGCTGGGATGACACGCAGTTCACCCGCGATTTTTACAACGGCGGCAATTCACCCAGGTACCTGGTCCAGGGATCCTGGTCGCCCGCCAATACATCCGGCAAATATCCAAGGCTTGACAATCAATGGCGTCCCAATAATAACTGGGCTTCCTCCATGTGGATCGTGAATGGCGCCTACGTCAGGCTGAAGAATCTCCAGCTGGCCTATAATTTCCATAGATCATCTGCCGGTGGCGCTCCCTTCGACGCGCAGCTCTACATCGCCTCCATGAACCTGCTGACCTTTTCCGCTTTCAAATACCTGGACCCGGAGGCTCCGAATGTAAATAACGGCTATTATCCCCAGCAGAAGACCTTTAGCATGGGCGTCCGTGTAACTTTTTAA
PROTEIN sequence
Length: 1149
MDLKALCIIPPRAGFTKTMRIMKTTALFLLAACLQVSARGYAQKITISEKNASLEKVFSLIERQSGYQFWYDQQLLEGAGSVDLSIKEASLEQALQLLFRGRQLTYTIVRKTIVVRSRSTPSPDPQRGDTSQLPNASSKADLHGVVYNEEGKPLAGASVMVKESGKGTVTDDKGEFELRMVDRNATIVISGVNMEQQEVRVNGRTNIVATLKTQVSSLNETVVVGYGTQKRVSLLGAVSTVGAADIMKGAGTNLSQAIVGKLPGLVTRQESGLPGSDQVNIYVRGFGSLNSNAPLVLVDGVERSISSLDPSEIESVTILKDAASAAVYGVRGANGVILVTTKRGRTGRPAFTYTGSYTISQNTRMPEYLNGQEFVKWYNYADEINGRGHTFSDAVVDKVTKGDADGIYGNTNWQKQLLRSAPVMQHNISLRGGDQSIKYFMSLGYLNQQGIIKGVDYSRYNIRLNVDANVTNDFFIGLNLGGNTGNANSPQISNFSGNGNSVTTNLMNQIITAHPYLNPRTPDGLYLSSALQPGDNPLAARDLSGYNDNDNTVLQSSLTLQYKLPYVKGLSFKAVASYDKNYYHTKSFYTPYTLSTVDPTQSSSSLYETASPYGTIAMLSESYTQSNRWTLQEYINYDRVFGRHTVGALVVAEQSGYHYTGLGASAQNFDLTDLSEFGFAKDNPNKPYGSSGNTNRAGWVGRVNYMFDNRYLAEFSGRLDASTNFPKNNRYGFFPSFSAGWRVSEEDFFKALHSPVSNLKLTASYGLLGNDATGGTYEYLQYFNLSTSPVANFGGSNVNGLLPTSYPNTKLTWERSKTSNLGLQVELWKGLLSAEANAFYKLTSNILTSVSSTYPPSLGGYYPTTVNSGKVDNRGFELVLGHKNKLGEFSYTLTGSISWAHNRILNMDQSADIPEYLSLIGRSMGAKTGLVAQGLFQSDAQAAKSPVVSSTARAGDIRYKDINGDGKITYDQDVTIIGRSSYPELNYSFNYASSWKKFELSFLVQGTAICDNALMGYYDGIGWDDTQFTRDFYNGGNSPRYLVQGSWSPANTSGKYPRLDNQWRPNNNWASSMWIVNGAYVRLKNLQLAYNFHRSSAGGAPFDAQLYIASMNLLTFSAFKYLDPEAPNVNNGYYPQQKTFSMGVRVTF*