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berkeley_reactor_200306_biofilm_scaffold_124345_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(24517..25455)

Top 3 Functional Annotations

Value Algorithm Source
Ribokinase {ECO:0000313|EMBL:EEU51681.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EEU51681.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 310.0
  • Bit_score: 368
  • Evalue 7.80e-99
Ribokinase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B870_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 309.0
  • Bit_score: 368
  • Evalue 5.50e-99
ribokinase similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 310.0
  • Bit_score: 368
  • Evalue 1.60e-99

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Taxonomy

Parabacteroides sp. D13 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 939
ATGAATAAGACGATGGAAACGCATGAAAGAAAGAATATCCTGGTCATCGGCAGCAGCAACACTGATATGGTGGTCACTGTCGACAGACTGCCCGCGCCGGGAGAGACCCTGTTGGGAAAAAGAAACAGTTTTTTTTCGGCCGGCGGTGGAAAAGGTGCCAACCAGGCTGTTGCCGCAGCGAGGCTCGGCGCCTCCGTCTCCCTGGTATGCAAAACAGGTAATGATGTGTTCGGACAACAGGCGAGGAGCTCTTTCGAAAAAGAAGGCATCGATACCCGCCATGTATTCACAGATCCGGCTCTTCCATCTGGTGTAGCATTGATCACCGTAGATATGCAGGGTGAAAATTCCATCGTCGTGGCGCCGGGCGCCAACGACAGCTTATTGCCTGCAGACCTGGCTGCTGTGCCTGGGCTCATCAGGGAAAGCGATATTATTTTGATGCAGTTGGAGATTCCGCTGGAGTCGGTGGCCTATGTCGCGGACATGGCCTTCCGTAAGAATAAACGGGTCATCCTCAATCCCGCACCGGCGCAATCACTGCCCGCAGACCTGCTCAGGCATATTTCCCTTATCACGCCCAACGAGAAAGAGGCCAGCCTCATCAGCGGCGTGAAAATTACAGACGGAGATACTGCCCGGACGGCAGCCAGGATGATCGCACAAATGGGAGCCGCCGATGTCATCATCACCCGGGGCAAGGAAGGAGCGCTCATCTTCAGCCAAGGCCGGTTTATCGAGACCCCTGCCTTGAAGGTAAAGGCAGTGGACACCACCGCCGCGGGGGATGTTTTCAACGGGGCATTGGCCGTCGCGCTGGCAGAGGGTCATTCCCTCGTGGATGCAGCCCGTTTTGGCGCAGCTGCAGCAGCCTTGTCGGTGACGCGAAAAGGAGCACAATCTTCGGCGCCCTATCGCCGGGAAATATCGACCTTTTAA
PROTEIN sequence
Length: 313
MNKTMETHERKNILVIGSSNTDMVVTVDRLPAPGETLLGKRNSFFSAGGGKGANQAVAAARLGASVSLVCKTGNDVFGQQARSSFEKEGIDTRHVFTDPALPSGVALITVDMQGENSIVVAPGANDSLLPADLAAVPGLIRESDIILMQLEIPLESVAYVADMAFRKNKRVILNPAPAQSLPADLLRHISLITPNEKEASLISGVKITDGDTARTAARMIAQMGAADVIITRGKEGALIFSQGRFIETPALKVKAVDTTAAGDVFNGALAVALAEGHSLVDAARFGAAAAALSVTRKGAQSSAPYRREISTF*