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berkeley_reactor_200306_biofilm_scaffold_124345_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(32891..34525)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DC66A6 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 561.0
  • Bit_score: 436
  • Evalue 3.80e-119
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 552.0
  • Bit_score: 407
  • Evalue 3.10e-111
RagB/SusD domain protein {ECO:0000313|EMBL:ADY53517.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 552.0
  • Bit_score: 407
  • Evalue 1.50e-110

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1635
ATGAAAATGATCAATCTCAGCACACGATATATATTTCTCCTGGCGCTGCTGGCCAGCATGGCAGCCGGAGGCTGCAAAAAGACCCTCCAGGAGAGCCCCGCCTCTTTCTATTCGCCGAATAACCTGTATAAAACAGAGGCTGACGCGCAATCTGCCGTCACCGGCCTCTACGGCACCCTTACAGGCTGGAGCTTCTTCAAAGCACCCTATCTGTTCAGTGAGGATGCGGACCACGATCACATCGTAGGCCCCGTCTGGAACTTCAGCAGCCAGGGCGCCGGCGCCTATGACCAATACTGGGGCGTGGGCAGCATGTGGCAGGGTTTGTATAATATCTCCGCCCAGGTGAATACCCTGCTGGAAAAAATGCCAGGCATCAAGTTCACAACGGATTCCACCAGGAACCGTCTGATGGGGGAAGCTTATTTCTTCCGCGGCTGGTCATACTTCAACCTGGTCAGATTGTGGGGTGCCGTCCCCGTACGGCTGCAGAATGTCTCCATCGGATCGGCAGACAAAGCCAGGTCTTCCGTGGCGGAGGTGTACCAGCAGGTGATCTCCGATCTTTCCAGGGCCGACAGCCTGCTGCCTTCCCTGAGCAGCCATTTCTTAGGCGCTACCGGATCTGTAACCCAGGGCGCTGCGAAAGCCCTGCTGGCCAAAGTATACCTCACCATGGCATCGGGATCGGCCACAGGTACGGTGACAGTCCGCGGCGGAACGGACAACGCTTACTATACTTATAATAAAGACGTAGTAGAAGGCTACGGTGGCATGGACAGCAAGTCTCTCTTTATAAAAGCAAGGGATAAGGCCCTGGAGGTGATTAATAGCAAGCAGTATGAGCTCATGCCCACCTACATGGACATCTGGGGTCGGGCGAATAAGAACAATAAGGAAATGATCTGGGAATACCAGACGCAGGACAACAGCACTTACGGCACTTACCTTCAATACTGGTATTCCTCGCCTTATTATGGCGGTACCTCGTACATGTGGATGGCGAAGAACTTGTACGACAGCTACCAGCAGCAGGACGACCGCGCCCTCAACGGGGTCTTCCACCAATACTTCATGTATGGTGCGTGGATGTTGTACCCCGAGCGCGATTCCTCGCTATACAAGGCCGCCCCGGGAGGAAATATAGCGAAGTTCTATACAGACTATTCCCATCCGTTCACGAAGAAATACTGGATCGGCACTTCCACGGAGATAGGCGATGCCGCCACTTCCACCAATGGTGGCCTGCGCGATGTCAATTTTCCCTTCCTGCGATACGCAGACGTTCTGCTGATGTACGCCGAAGCAGCCAATGAAGCAGGCAATGGCCCCGGGGCCGATGCTTATGACGCCCTGAACCAGGTCCGCCGCAGAAGCAATGAATCGGATACCTCCGGGCTCGACCAGCAACAGTTCCGCTCCCTGGTGCTCGAAGAAAGAGGGAAGGAATTCTACCAGGAGAACAACCGCCGTTTCGACCTCATCCGCTGGGGGATATTCACCCAGGTGATGAACAAGGTCGGATCGATGGAAAATGTCATCAAAACAAGATCTAAGAAAAACCTGCTGTTCCCGATCCCTCAAAGCGAGATCAATGCGAATAAGCTGATCGGCGGCAATAATTTCGGGTGGTAG
PROTEIN sequence
Length: 545
MKMINLSTRYIFLLALLASMAAGGCKKTLQESPASFYSPNNLYKTEADAQSAVTGLYGTLTGWSFFKAPYLFSEDADHDHIVGPVWNFSSQGAGAYDQYWGVGSMWQGLYNISAQVNTLLEKMPGIKFTTDSTRNRLMGEAYFFRGWSYFNLVRLWGAVPVRLQNVSIGSADKARSSVAEVYQQVISDLSRADSLLPSLSSHFLGATGSVTQGAAKALLAKVYLTMASGSATGTVTVRGGTDNAYYTYNKDVVEGYGGMDSKSLFIKARDKALEVINSKQYELMPTYMDIWGRANKNNKEMIWEYQTQDNSTYGTYLQYWYSSPYYGGTSYMWMAKNLYDSYQQQDDRALNGVFHQYFMYGAWMLYPERDSSLYKAAPGGNIAKFYTDYSHPFTKKYWIGTSTEIGDAATSTNGGLRDVNFPFLRYADVLLMYAEAANEAGNGPGADAYDALNQVRRRSNESDTSGLDQQQFRSLVLEERGKEFYQENNRRFDLIRWGIFTQVMNKVGSMENVIKTRSKKNLLFPIPQSEINANKLIGGNNFGW*