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berkeley_reactor_200306_biofilm_scaffold_7733_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(35598..36491)

Top 3 Functional Annotations

Value Algorithm Source
Putative AraC family transcriptional regulator n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4Q3_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 293.0
  • Bit_score: 343
  • Evalue 1.40e-91
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 293.0
  • Bit_score: 343
  • Evalue 3.90e-92
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:AFL50859.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 293.0
  • Bit_score: 343
  • Evalue 1.90e-91

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGGTAATTCTGTGCTCGACCATCTGGTCGACCGCGGCCCGGTCCGCCGGGTGATCTCGCTGCCGCGCCGGCGCGCTCCGCTGCACATCATGCCGACCAGCGCCGGCTACGAGATCGCCGAGGGGCCGGCCTATGACTGGGACGGGCGCAAGCGCGGCAACACCCCCTTCTCGGTGCTGCAGCACACCGTCGCCGGCGCCGGCCGGCTGCACTACGAGCGCCGGGAGCACCGGCTGCGGCCGGGCGACACGATGCTGGTGACCATTCCCCATCCCCACCGCTACTGGCTGGAGGGCGGGGAGACCTGGTCGTTCTTCTGGATCGCGATGAGCGGCCAGGAGGCGCTGCGGCTGCACCGGGCCATCCTGGCCGCGGCCGGTCCGGTGTTCCGCCTCCGGACGGAGACGGTCGACGAGCTCGCCCGGGCCTGCCTGGCGCTCGCCGACGAACCGCTGGAGGCCGGCCGCGCCTCCGGCATCGCCTACACCGCCACCATGGCGCTGCACGACGACCTCCTGGCCCGCCAGGAGGCCGGCGCGGGCGAAGCCCGCCACGCCGCCATCGCCCGCGTCACCGCCCATGTCCGCCAGCACCTCGACGAGCCCCTGGAGGTGCAGGCGCTTGCCGACGTCGCCGGCATGAGCCGCGCCCATTTCAGCCGCCTGTTCGCCCGGGTCGAGGGCCTGCCGCCTTCCGAATTCGTGCTGCGCGAGCGCATGCAGCGGGCGGCGCGCCTGCTGGTCAACGGCCAGCTCAGCGTCAAGGCCATCGCCAGCGCCTGCGGCTTCGCCGACCCCAACTATTTCGCCAAGGCCTTCCGCCGCAGCTTCGCCATCAGCCCGTCCGCCTTCCGCACGACTGGCATGTATGGGGGGCCGCGGTCGGAACGGTGA
PROTEIN sequence
Length: 298
MGNSVLDHLVDRGPVRRVISLPRRRAPLHIMPTSAGYEIAEGPAYDWDGRKRGNTPFSVLQHTVAGAGRLHYERREHRLRPGDTMLVTIPHPHRYWLEGGETWSFFWIAMSGQEALRLHRAILAAAGPVFRLRTETVDELARACLALADEPLEAGRASGIAYTATMALHDDLLARQEAGAGEARHAAIARVTAHVRQHLDEPLEVQALADVAGMSRAHFSRLFARVEGLPPSEFVLRERMQRAARLLVNGQLSVKAIASACGFADPNYFAKAFRRSFAISPSAFRTTGMYGGPRSER*