ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_7733_56

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 65264..66052

Top 3 Functional Annotations

Value Algorithm Source
caiD; carnitinyl-CoA dehydratase (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 262.0
  • Bit_score: 323
  • Evalue 2.80e-86
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:CAM02131.1}; EC=4.2.1.- {ECO:0000313|EMBL:CAM02131.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 262.0
  • Bit_score: 323
  • Evalue 1.40e-85
Carnitinyl-CoA dehydratase n=2 Tax=Saccharopolyspora erythraea RepID=A4FDK6_SACEN similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 262.0
  • Bit_score: 323
  • Evalue 1.00e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharopolyspora erythraea → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAGCGAAGCCGTCAAGCTGGAACGTCGCGGCGCGGTGCTGGAGGTCACGCTCGACCGGCCCAAGGCCAACGCCATCGACCTCGCCACGTCCAGGGCGCTGCACGCCGCCTTCCGCACCCTGCAGGACGACCCGGCGCTCCGGGTGGCGATCCTCACCGGCGGCGGCGAGCGCATCTTCTCGGCGGGCTGGGACCTCAAGGCTGCGGCGTCGGGCGCGGAGGAGCCGGACACGGATTTCGGCCCCGGCGGCTTTGCCGGCCTCACCGCCTTCTGGGAGCTGTCCAAGCCGGTGATCGCCGCGGTCAACGGCGTCGCCATCGCCGGCGGCTGCGAGCTGGCCCTGGCCGCCGACCTGATGGTGGTGGCCGACCATGCCGAGTTCGCCCTGTCGGAGGTGACGGTCGGCCTGGTCGCCGATGCCGGCGGCATCCAGCGCCTGCCGCGGCGCATCCCGCCGGCGGTCGCCGCGGAGCTGCTGCTCACCGGCCGGCGCTTCACGGCCGCGGAGGCCAAGGCCTGGGGCCTGGCCAATGCCGTCGTGCCGGGCGCCGAGCTGATGGCGACGGCCCGCGCCCTGGCCGAGCGCATCGTCGCGGCAGCGCCGCTGGCGGTGGCCGCGGTCAAGGCGATCCTGGCCGAGACCGACGGCATGAGCGTGCGCGAGGCCTATGAGCACGTCGCCGCCGGCAAGGTGCCGGCACACCGGGCCATGCAGCTCTCGGAGGATTCGCGCGAAGGTGCCAAGGCCTTCGTCGAGCGCCGGGCGCCGGTGTGGAAGGGACGCTGA
PROTEIN sequence
Length: 263
MSEAVKLERRGAVLEVTLDRPKANAIDLATSRALHAAFRTLQDDPALRVAILTGGGERIFSAGWDLKAAASGAEEPDTDFGPGGFAGLTAFWELSKPVIAAVNGVAIAGGCELALAADLMVVADHAEFALSEVTVGLVADAGGIQRLPRRIPPAVAAELLLTGRRFTAAEAKAWGLANAVVPGAELMATARALAERIVAAAPLAVAAVKAILAETDGMSVREAYEHVAAGKVPAHRAMQLSEDSREGAKAFVERRAPVWKGR*