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berkeley_reactor_200306_biofilm_scaffold_7733_58

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 67336..70440

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent nuclease subunit B n=1 Tax=Rhodovulum sp. PH10 RepID=J6JG93_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 1076.0
  • Bit_score: 849
  • Evalue 2.70e-243
ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EJW13655.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 1076.0
  • Bit_score: 849
  • Evalue 3.80e-243
Double-strand break repair protein AddB similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 1056.0
  • Bit_score: 839
  • Evalue 1.00e-240

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3105
ATGGCGCGCGGGCTCAACCTCTTCACCATCCCGCCGGGGGCGCCCTTCCTCGCCACGCTGGTCGACGCCCTGGTCGACGGCGTGCTCGTGCCCGGCTTCGTGCCCCGCGCGGACCCGCTGGCGCTCGCCTCCGCCACGCTGTTCCTGCCGACGCGCCGCTCGATCCGGGCGCTGCGCGAGGTGTTCCTCGATCGGCTCGGCGGCGAGGCGGTGCTGCTGCCGCGCCTGATGGCGCTCGGCGAGGTCGACGAGGACGAGGCCGCCTTCGAGGCCGGCGCCGAGGCGCTCGGCCTGCCCGAGGCGGTCGGCGGGCTGGAGCGCCAGATCGCCCTGACCCGGCTGATCCTGGCCTGGAGCAAGGGCCTCGCCGGGGCGCTGCTGCCGGAAGAGGGCGAGGCGGAGCCGCTGCTGATCCCCTCCTCCTCCGGCGACGCGGCGGCCCTGGCGGTGGAGCTCGGGCGCTTCATCGACGGCATGACCATCGAGCGCGTGCCCGCGGCGGCGCTGGAGATCCTCACCGCCGAGCACCAGGGGCGCTACGACCGCTATTGGGACCTGACCACCCGTTTCCTGGAGATCGTCACGGCGCAATGGCCGGCGCATGTCGCCGAGCAGGGGCGGCTCGATGCGGCCGAGCGCCGCAACCTCTTGCTGGAGGCCGAGGTCGAGCGGTTCTCGGCCGCGGCGACCGGGCCGGTGGTGGTCGCCGGCTCGACCGGCTCGATTCCGGCGACGCGCGACCTGATGCGGGCGGTGGCGGCCAACCCGCGCGGCGCCGTGGTGCTGCCGGGGCTCGACCAGGGCCTGGACGAGGCCTCCTGGCGAGCCATCACCGACGGGGAGGGCGCGCCCGGCCACCCGCAGGCCGGCCTCAAGGCGCTGCTCGCCGCGTTCGGCGTGGAGCGGGAGGCGGTGGCGCCCCTCGGCCGCGCGCCACGCGCCAGGGCCGAGCGCCAGCGCATCCTGTCCGAGGCGCTCCGGCCGGCGGAAACGACGCATCTATGGGCCGCAACGCCTGGCGCGGACGCCGCGGAAGCGGGCGCCGCCTTCGCCGACGTCACCCTGGTGGAGGCGGCGAACGAGGCGGAGGAGGCGCTCGCCGTCGCGCTGGTGCTGCGCGAGACGCTGGAGATGCCGGGCCGCCGGGCGGCGCTGATCACACCGGACCGGGCGCTCGCCGCCCGGGTGGCGGCCGAGCTCGGCCGCTGGGGCATCGAGGCCGACGACAGCGCCGGCCGGCCGCTGCTGTCGACCCCGCCCGGCGTGTTCGCCCGCCTGGTGCTCGACGTGGCGCTGTCGGATTTCGCCGCCGTGCCGGTGCTGGCGCTGCTGAAGCACCCCGTCGCCGCTCTCGGGCTCGGCCGCGGCGCGGTGCGTGCGGCGACGCAGGCGCTCGAGATCGGCGCGCTGCGCGGTCCGCAGCCGCCGCCCGGCATCGTTGGTCTGCGCAAGGCGCTGGCGCTCGGCGAGGCCCGTGCCGGCGATCCCCATGCGCCGGCGGCGCGGCGGGCGCTCTCGGCCGCGGACTGGGCCGCTGCCGCCCGGCTGCTCGACGCGCTCGACACGGCGCTGTCGCCGCTGCGCGCCGCCCTGCGTGAGGCCGGTGCCGCGCCGGCGAGCACCCTGTTCGCCGCCCATGTCGCGGCGACCGAGGCCGCGGGCGCCGGCACGCCGGAACTCTATGCCGGCGAGGCCGGGGAGGCGCTGGCCGACTTCTTCGAGGAACTGCTCGCGGTGCCGCCCGCAGCGCTGGACTGCCCGGCCGCCGAATATCCTGGCTTGTTCGCGGCGCTGGCCGCCGGCCGCACCGCGCGCGGCGGCGAGCCGAGGCACCCCGCCATCGCGATTTTCGGCCTCCTGGAGGCGCGGCTCATTCCGGTCGATCGCCTGGTGCTCGGCGGCCTGGACGAAGGCGTGTGGCCGCCCGACATGCGCACGGATCCCTGGCTCAACCGGCCGATGCGGGCGGCGATCGGCCTGCCGGCGCCGGAAAAGCGCATCGGCCTGACCGCGCACGATTTCGAGCAGGCCTTCGGCGCCGGCGAGGTGGTGCTGACGCGGGCGCTGAAGCGCGGCGGCGCCCCGACCGTCGCCGCCCGCTGGCTGCAGCGCCTCGCCGCCGCCCGGCCGGACGTGCACGCGGCCATCGCCGCAGGCGGGGGCCGCTGGCGCGACCTCGCCGGGCGGATCGATGCGCCCCGCCAGGCTCTGCCGGCGCTCGGCGCCCCGGAGCCGCGCCCGCCCCTGGCGCTGCGCCCGGCCTCGCTGTCGGTGACGGAGATCGAGACCCTGGTGCGCGACCCCTACGCCATCTATGGCCGTCATGTCCTCGGGCTCGAGCCGCTCGAGGAGATCGCCACGGCGCCGGGCGCGGCCGACCGCGGCACCCTGGTGCACGCGGCGGCGGCCGAATTCGCCGCCCTGTGCGCCGGCGGCGTGCCGCCGGACGCCGAGGCGCGGCTGCGAGCGATCGAGGAGCGCCTGTTCGCCGATTTCGCCGATTATCCCGACGTGCAGGCCTTCTGGCGTCCGCGCTTTGCCCGCATCGCCGCCTTCCTGACGAAATGGGAGCGCAGCCGGCGCGGCGACCTCGCCGCCGTGCATGTCGAGGCGTCGGGCCGGCTCACCTGGGACACGGCGGGCGGGCGCGTCTTCACGCTCAGGGCCCGCGCCGACCGCATCGAGGCCCGGCGCGACGGCGGCTGGAGCATCGTCGACTTCAAGACCGGCCAGGCACCGACGGGCCCCCAAGTCCAGGTCGGCCTCGCCCCGCAGCTCGCCCTGGAGGCGGCCATGCTGATGCAAGGCGGCTTTGCCGGCCTGCCCCGGGCCGAGCTCCTCGCGGGCCTGGCCATCGTGCGGCTCGCCGGCGACCGCGAGGGCGGCCAGGAGAAGCCGATCCAGTTCAAGGACGAGACGGCCGAAGCGGTGGCGCTGCGCTCGCTCCTGCGGCTCAAGGGGTTGATCGACCGTTTCGAGGACCCGGCGACGCCCTATGCCTCGCGCCTGCACCCGATGTTCCAGAAGCGCTTCGCCGGCGACTACGACCACCTCGCCCGCGTGCGCGAATGGTCGCTGGCCGGCGAGGCGGAGGAGGCGGAATGA
PROTEIN sequence
Length: 1035
MARGLNLFTIPPGAPFLATLVDALVDGVLVPGFVPRADPLALASATLFLPTRRSIRALREVFLDRLGGEAVLLPRLMALGEVDEDEAAFEAGAEALGLPEAVGGLERQIALTRLILAWSKGLAGALLPEEGEAEPLLIPSSSGDAAALAVELGRFIDGMTIERVPAAALEILTAEHQGRYDRYWDLTTRFLEIVTAQWPAHVAEQGRLDAAERRNLLLEAEVERFSAAATGPVVVAGSTGSIPATRDLMRAVAANPRGAVVLPGLDQGLDEASWRAITDGEGAPGHPQAGLKALLAAFGVEREAVAPLGRAPRARAERQRILSEALRPAETTHLWAATPGADAAEAGAAFADVTLVEAANEAEEALAVALVLRETLEMPGRRAALITPDRALAARVAAELGRWGIEADDSAGRPLLSTPPGVFARLVLDVALSDFAAVPVLALLKHPVAALGLGRGAVRAATQALEIGALRGPQPPPGIVGLRKALALGEARAGDPHAPAARRALSAADWAAAARLLDALDTALSPLRAALREAGAAPASTLFAAHVAATEAAGAGTPELYAGEAGEALADFFEELLAVPPAALDCPAAEYPGLFAALAAGRTARGGEPRHPAIAIFGLLEARLIPVDRLVLGGLDEGVWPPDMRTDPWLNRPMRAAIGLPAPEKRIGLTAHDFEQAFGAGEVVLTRALKRGGAPTVAARWLQRLAAARPDVHAAIAAGGGRWRDLAGRIDAPRQALPALGAPEPRPPLALRPASLSVTEIETLVRDPYAIYGRHVLGLEPLEEIATAPGAADRGTLVHAAAAEFAALCAGGVPPDAEARLRAIEERLFADFADYPDVQAFWRPRFARIAAFLTKWERSRRGDLAAVHVEASGRLTWDTAGGRVFTLRARADRIEARRDGGWSIVDFKTGQAPTGPQVQVGLAPQLALEAAMLMQGGFAGLPRAELLAGLAIVRLAGDREGGQEKPIQFKDETAEAVALRSLLRLKGLIDRFEDPATPYASRLHPMFQKRFAGDYDHLARVREWSLAGEAEEAE*