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berkeley_reactor_200306_biofilm_scaffold_7733_59

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 70727..73603

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 957.0
  • Bit_score: 813
  • Evalue 2.80e-232
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036B3EC4 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 952.0
  • Bit_score: 837
  • Evalue 1.30e-239
double-strand break repair helicase AddA similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 952.0
  • Bit_score: 792
  • Evalue 1.30e-226

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2877
ATGTGCGGCCCCCGCGTGTGCACCGCCGTGACCCGCCACATCCCGCCCGTCACCATCGAGCGCCAGCGCCGGGCCTCCGATCCCGCCGTCTCGGCCTGGGTGTCGGCCAATGCCGGCTCGGGCAAGACCACGGTGCTGACGCGCCGGGTGGTGCGGCTGCTGCTCGCCGGGGCGGCGCCGGCGCGCATCCTGTGCCTGACCTTCACCAAGGCGGCGGCCGCCAACATGCAGAACCGCATCTTCCGCGACCTCGGCCGCTGGGCCCGCCTGCCCGATGCCGAGCTGGCGCGGGAGATCGCCGCGATCGAGGGAGCCTTGCCGGACGCGGCGGCGCTGGCCCGGGCGCGGCGGCTGTTCGCGGCGGCGGTGGAGACGCCCGGCGGCCTCAAGCTCCTCACCATCCATGCCTTCTGCGAGCGGGTGCTGCACCTCTTTCCCTTCGAGGCCAACGTCCCGGCGCAGTTCTCGGTGCTCGACGACCGCGGCGCGGCCGAACTGCTGGGCGATGCGCGCCAGGCCATGCTGATCGAGGCCAATCTCGCGCCCGACGGCCCTCTCGGCCGGGCCATGGCGCGGGTGGTCGAGGAGGCGGGGGCGGAGAGCTTCGACAAGCTGGTGGTCGAGCTCACCGGCGAGCGCGACACGCTGCGCGCCATCCTGCGCAAGGCGCGCACGCCGGCCGGCGCTGCCGCGCGCCTGCGGCGGGCCCTGGGGCTCGGGGAGGAGGAGACCGTCGCGGCGATCGAGGCGAGCATCTCCGGCGAAGGCCTGCCGGCTGCGGAATGGCGCAGCATCGCCGCCGAGCTGCGCGCCCTCGGCGGCAAATCCCACCTGAGCGCCGCAGCTTCCCTGGAGTCGGCGGCTGCCGCCGGCAGCCTGCGCGAGCGCTGCGAGGCCTATGCCGGCGTGTTCCTGACCCGGGAGGAGGCGCCCCGCGCGACCCTTCTGACCCAGGACGGGCGCAAGCGCCTGCCGGGCCTCGCCGCCCGGCTGGACGCGGAGCAGGCGCGCGTCGCCGACCTGGCCGAGCGCCGGCGCGCCGCCGCCTGCGTCGAGCGCTCCGAGGCGCTGCTGGTGCTGGCCGAGAAGCTGATAGCCGGCTACGAGACCGGCAAGCGGCGGCGGGCGGTGCTGGATTTCGACGACCTCGTCGCGCGCACCCTGTCGCTGCTGCGGCGCGCCGGGGCGGACTGGGTGCTCTACAAGCTCGATCAGGGCATCGACCATATCCTGGTCGACGAGGCGCAGGACACCAGCCCGTCGCAATGGGACATCGTCGAGCGCCTGGCGCGCGAGTTCTCGGCCGGGGAGGGTGCGCGCCTCGTGGCACGCACCCTGTTCGCGGTCGGCGACGAGAAGCAGTCGATCTATTCCTTCCAGGGCGCGGCGCCGGACGCCTTCGCCCGGATGCGCCGGCTGTTCGCCGGCCGCTTCCGCGACGCCGAGCAGCCGTTCGAGGAGATCGACCTCACCCATTCCTTCCGCTCGACCCGCGACGTGCTGGCAGCGGTCGATGCGGTGTTCGCCGACGTCGACAACCGGCGGGGCCTGTCCTTCGACGATGTCGCGACCGAGCACCCGACCGTGCGCGGGGAGGAGCCGGGGCGTGTCGAGGTCTGGCCGGTGGAGCGCCCCGACGCAGAGCCCGACATCGAGGCCTGGGACGCGCCCTTCGACGAGACGCCGGGCTCGAGCCCGGCGGCGAAGGTGGCGCGGCGGGTGGCGCGCGAGGTGCGGCGGCTGATCGACGAGGGCGATCCGGCGACGGGCGCGCGCTACCGCGCCGGCGACGTCATGGTGCTGGTGCGCAGCCGCAACGCCGTGTTCGAGGCGGTGATCCGCGAATTGAAGCACGAGCGCGTTGCCGTCGCCGGCGCCGACCGGCTGGTGCTGACCGACCATATCGCCGTGATGGATCTGGTGGCGCTGGCCCGCTTCGTGCTCGCCCCCCAGGACGACCTGACCCTGGCGGCGCTGCTGAAGACGCCGCTGATCGGGCTCGACGACGCGGTGCTGATCCGCCTCGCCCCTGGCCGGCGCGGCACGCTCTGGGCGGCGCTGGAGGCGGCCGCCGCCGACGATCCGGCCTGCCGCGCCGCGCATCGGCGGCTGGCGCAATGGATCGACGAGGCGGCATTCAAGCCGCCGACGACCTTCTTCGCCGACCTCCTCACCCGTGACGGCGGCCGGCGTGCCATCCTGGCGCGGCTCGGGCCGGAGGCGATCGACGCGCTCGACGAGTTCCTCAACGCCGCCGCCAATTACGAGCGGGCGGAAACGCCGAGCCTCCAGGGCTTCCTCGCCTGGCTCGGCGCCGCCGAGGCGCAGGTGAAGCGCGACATGGACGTGGCGCGCGACGAGGTGCGCGTCATGACCGTGCACGGCGCCAAGGGGCTGGAGGCCCGGGTGGTGGTGCTGGCCGATACCTGCGGCACGCCGAGCGGCCGGCACGATCCGAAGCTGTTCTTCCCCGTCGATCCCCTGGCGCCGCAGGGCGAGCCGCTGTTCGCCTGGTCGCCGAAGATGGCGTCCGATCCGCCGCTGCTGGCGCTGGAGCGCCTGCGGCTGCGCCGGGCCGACGAAGGCGAGCATCGGCGGCTGCTCTATGTGGCGATGACGCGGGCGGAGGAGCGCCTGGTCGTCACCGGCTTCGAGGGCAAGCGGGCGCGGCGCGACGGCAACTGGTACGACATGATCGAGGAGGCCCTGCGCGCCGGCGGGGCGCGGGCCGAGCCCATGCCGGAGGGTGCCGGCGAGCGCCTCGTCTGGGAGCGGACGCCGCGCATCGCCGTCGCCGCGCCGTCGCCGGCGGCCGCGGCGGCGCGCGAGGCCGATCCGCCCTGGCTCCACGCCTTCGCCCCGGCCCCGGCGCCGGCG
PROTEIN sequence
Length: 959
MCGPRVCTAVTRHIPPVTIERQRRASDPAVSAWVSANAGSGKTTVLTRRVVRLLLAGAAPARILCLTFTKAAAANMQNRIFRDLGRWARLPDAELAREIAAIEGALPDAAALARARRLFAAAVETPGGLKLLTIHAFCERVLHLFPFEANVPAQFSVLDDRGAAELLGDARQAMLIEANLAPDGPLGRAMARVVEEAGAESFDKLVVELTGERDTLRAILRKARTPAGAAARLRRALGLGEEETVAAIEASISGEGLPAAEWRSIAAELRALGGKSHLSAAASLESAAAAGSLRERCEAYAGVFLTREEAPRATLLTQDGRKRLPGLAARLDAEQARVADLAERRRAAACVERSEALLVLAEKLIAGYETGKRRRAVLDFDDLVARTLSLLRRAGADWVLYKLDQGIDHILVDEAQDTSPSQWDIVERLAREFSAGEGARLVARTLFAVGDEKQSIYSFQGAAPDAFARMRRLFAGRFRDAEQPFEEIDLTHSFRSTRDVLAAVDAVFADVDNRRGLSFDDVATEHPTVRGEEPGRVEVWPVERPDAEPDIEAWDAPFDETPGSSPAAKVARRVAREVRRLIDEGDPATGARYRAGDVMVLVRSRNAVFEAVIRELKHERVAVAGADRLVLTDHIAVMDLVALARFVLAPQDDLTLAALLKTPLIGLDDAVLIRLAPGRRGTLWAALEAAAADDPACRAAHRRLAQWIDEAAFKPPTTFFADLLTRDGGRRAILARLGPEAIDALDEFLNAAANYERAETPSLQGFLAWLGAAEAQVKRDMDVARDEVRVMTVHGAKGLEARVVVLADTCGTPSGRHDPKLFFPVDPLAPQGEPLFAWSPKMASDPPLLALERLRLRRADEGEHRRLLYVAMTRAEERLVVTGFEGKRARRDGNWYDMIEEALRAGGARAEPMPEGAGERLVWERTPRIAVAAPSPAAAAAREADPPWLHAFAPAPAPA