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berkeley_reactor_200306_biofilm_scaffold_4471_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5752..6678

Top 3 Functional Annotations

Value Algorithm Source
2,3-dimethylmalate lyase (EC:4.1.3.32) similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 397
  • Evalue 1.80e-108
2,3-dimethylmalate lyase {ECO:0000313|EMBL:ABG63897.1}; EC=4.1.3.32 {ECO:0000313|EMBL:ABG63897.1};; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 397
  • Evalue 9.00e-108
2,3-dimethylmalate lyase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FC8_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 397
  • Evalue 6.40e-108

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Taxonomy

Chelativorans sp. BNC1 → Chelativorans → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGGCCCCTGTGCAGGTTTCTTCGGCGTGGGCGAGCCTTCGCAGGGGGGCGAATTGGATCAGGGGATCAGACAGCGCTTCAGGAGCCGCGTCGAAGCACGCGAGGGGATCCTGCTGCCGGGAGCCGCCAATGCGCTGGCCGCGCTCGTCATCGCGGATCTCGGCTTCGAGGCGCTCTATCTGTCCGGCGCCGGCCTGACCAACACCTATCTCGGGCTGCCCGATCTCGGCTTCGTGTCCTTGCCCGAGCTCGCCCAGCACACCAGCGCCCTGCGGAATGCAACGGACCTGCCGCTGGTCGTCGACGCCGACACCGGCTTCGGCAATGCGCTCAACGTGCGCCACACCGTGAGAACCCTCGAACGAGCCGGGGCGAGCGCGATCCAGCTCGAGGACCAGGTCTCGCCCAAGCGCTGCGGTCACTTTGCCGGCAAAGATGTCGTGTCGACGGACGAGATGGTCGACAAGCTCAAGGCGGCCGTCGATGCCAGGCACGACGAGAACCTGCTGGTCATCGCCCGGACGGACGCCCGGGCCGTGCACGGCTTCGGCCGGGCGATCGAGCGAGCGAACCGCTATTGCGAAGCCGGCGCCGACGTCCTGTTCATCGAGGCGCCGCAGAGTGAAGACGAGATCCTGTCCATGGCGCGGCTCGTCGGCGCGCCTCAGCTCGTCAACATGGTCGTGGGCGGGCGCACGCCGATCCTCGGCCGCGAAAAACTCCGCAAGGCAGGCTTCAGCCTCATTCTCTATGCCAATGCCGCGCTCCAGGGGGCGGTGGCGGGCATGGAGCTGGCGCTCACGCACCTGCGGGATACCGGCGCGCTCGACGAATCCGGTCCCGTCACGAGCTTCCGGCGTCGCCAGGACCTGGTGCGACGGGACTTTTACGATCAGTTGGAGCGGCGTTACTCCGCAAAGACCTGA
PROTEIN sequence
Length: 309
MGPCAGFFGVGEPSQGGELDQGIRQRFRSRVEAREGILLPGAANALAALVIADLGFEALYLSGAGLTNTYLGLPDLGFVSLPELAQHTSALRNATDLPLVVDADTGFGNALNVRHTVRTLERAGASAIQLEDQVSPKRCGHFAGKDVVSTDEMVDKLKAAVDARHDENLLVIARTDARAVHGFGRAIERANRYCEAGADVLFIEAPQSEDEILSMARLVGAPQLVNMVVGGRTPILGREKLRKAGFSLILYANAALQGAVAGMELALTHLRDTGALDESGPVTSFRRRQDLVRRDFYDQLERRYSAKT*