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berkeley_reactor_200306_biofilm_scaffold_4471_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9668..10387

Top 3 Functional Annotations

Value Algorithm Source
Phophonate C-P lyase system transcriptional regulator PhnF, GntR family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LNP5_DESBD similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 238.0
  • Bit_score: 168
  • Evalue 4.90e-39
Uncharacterized protein {ECO:0000313|EMBL:KKB11581.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 236.0
  • Bit_score: 186
  • Evalue 3.20e-44
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 238.0
  • Bit_score: 168
  • Evalue 1.40e-39

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGCGATCTGGCAAGGCATCAGCGACACGCTCGTCAAGGAAATCGAAGGTGGCGTGCTGGAGTCCGGCGGACGGCTGCCGGGCGACGTCGAGCTTGCCACGCGTTTCGGGGTCAACCGCCATACGGTGCGGCGCGCGCTATCACATCTCCAGGCCCTGGGACTCGTTCGCTCCGAGCGTGGGCGCGGCACCTTCGTGGTTGATGATGCCATCGCCTATCGTATCGGGACCCAGGCCCGCTTCGAGCAGAACCTGCTCGAAAACATGCGCGTGCCGACCCGGCAGGTCCTGTCGGTGATCACCTATCCCGCACCGACGGCGATCGCACATCAGTTGCAGATCAAGGCAGGCTCGCCGATCCAGACGGTCACGCTGCTCGGCGAGGCCAACGGCGTACCGGTGCATCAGGCCCTGATCCACTTTCCGGTGGAGCGGTTCCCGGATGTCGGGCAGGTCCTCTCCCGGATACCCCTCGGGCAGAGCTTGCCACTCTCCTTGTCGGAGCTTGTGGCGGAGCTGGGCGTGAAGACCTTCCGGCGCAAGACCGCGCGCATCCGATGCCGCCTGCCCGAGGCGGAGGAAGCCCGCCATCTCAAGATGTCGGCGCAGGACCCGGTCTTTCAATTGGATATTCTCAACGTCGACGACGCCGACGTGCCGGTGTTCTTCGGCACGACGGCCTACTGCGGCAGCCGCGTCGACTTCATCCTCGACTATTGA
PROTEIN sequence
Length: 240
MAIWQGISDTLVKEIEGGVLESGGRLPGDVELATRFGVNRHTVRRALSHLQALGLVRSERGRGTFVVDDAIAYRIGTQARFEQNLLENMRVPTRQVLSVITYPAPTAIAHQLQIKAGSPIQTVTLLGEANGVPVHQALIHFPVERFPDVGQVLSRIPLGQSLPLSLSELVAELGVKTFRRKTARIRCRLPEAEEARHLKMSAQDPVFQLDILNVDDADVPVFFGTTAYCGSRVDFILDY*