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berkeley_reactor_200306_biofilm_scaffold_4471_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21218..22225

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9U6_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 341.0
  • Bit_score: 342
  • Evalue 2.70e-91
ABC transporter permease {ECO:0000313|EMBL:KJC42303.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 337.0
  • Bit_score: 350
  • Evalue 1.40e-93
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 341.0
  • Bit_score: 342
  • Evalue 7.60e-92

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGTCTGAGGCCGAGATCGCCCCGCGCATCGGCGACGCCGTCGCGGCGAAGGCGCTGCGCCTCCTCCTGGCGCTGCTGCTGCCGATCCTGATCGTCGTGGTCGAGCTTTGCGTCTACCTCGTGGTGCCGCGGGTGCTCTCGCCCGGCAACCTGCGCAACATCCTGATCCAGTCGAGCTATCTCATGCTGTTCGCCTCGGCGCAGATGGTGGTGATCCTGACGCGCGGCTTCGACCTGTCGCTCGGTGCCAGCGTCTCGGCCGTCAGCGTCGCCAGCGCCATGGTCCTGACCAGCCTGGCGGCGGCGGGCTATGATCCCGCCGTCGTCGTCGCGGCGGGCCTCGTGACCGGGCTCGGCTTCGGCCTGTTGGTCGGCCTGTTCAACGGCGGCTTCATCGCCGGGCTCGGCATCAACCCGTTCATCGTCACCCTCGGCAGCCTCAACATCTGCCTCGGCCTCGCCACCACCATGTCGGGCGGCCGGCCGGTGTTCGACGTGCCCGATGCCCTCAGCACGCTGCTCTACAACGGCAAGCTGATCCCCTGGCTGCCGATCCCGGTGATGCTGGCGATCGCGGTGTGCCTCGCCCTGCATTTCGTGCTCGGCCACACCGTGTTCGGCCGCTCGCTCTACCTCATCGGCAACAATCCGCGCGCCGCCGCGGTGGCGGGCATCCCCCGCCGGCGCTACCTCCTGCTCGCTTATGTCCTCGCTGGGGTGCTGGCCGCCTTCGGCGCGCTGATGCTGACGGCGCGCACCGGCTCGGGCGAGCCCAATCTCGGCGGCAGCCTGATGCTGGAGAGCATCGCCGCCGCTGTCATCGGCGGCGTCAGCCTGCAGGGCGGCGTCGGCGGCGTGGTGCCGGTCATCCTCGGCTCGCTGTTCATCACCATGATGTCGAACGCCATGAACCTCCTGCGCATCGACGGCTATATCCAGCAGATCATCCTGGGCGTCGTCATCATCGCCGCCATCGTCCTCGACCGCATCCGCGCTATCCGGACCTGA
PROTEIN sequence
Length: 336
VSEAEIAPRIGDAVAAKALRLLLALLLPILIVVVELCVYLVVPRVLSPGNLRNILIQSSYLMLFASAQMVVILTRGFDLSLGASVSAVSVASAMVLTSLAAAGYDPAVVVAAGLVTGLGFGLLVGLFNGGFIAGLGINPFIVTLGSLNICLGLATTMSGGRPVFDVPDALSTLLYNGKLIPWLPIPVMLAIAVCLALHFVLGHTVFGRSLYLIGNNPRAAAVAGIPRRRYLLLAYVLAGVLAAFGALMLTARTGSGEPNLGGSLMLESIAAAVIGGVSLQGGVGGVVPVILGSLFITMMSNAMNLLRIDGYIQQIILGVVIIAAIVLDRIRAIRT*