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berkeley_reactor_200306_biofilm_scaffold_4471_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 23536..25884

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, chemotaxis family, sensor kinase CheA n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIS1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 781.0
  • Bit_score: 1196
  • Evalue 0.0
Two-component system, chemotaxis family, sensor kinase CheA {ECO:0000313|EMBL:ERF84703.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 781.0
  • Bit_score: 1196
  • Evalue 0.0
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 778.0
  • Bit_score: 1164
  • Evalue 0.0

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
ATGCCGGACCCTGCCGCCGCCACCATGGACCTGCCCCGGCGCGATGCCCGCGACAAGCTGCAGGGGCGCACCCGCTACACCGTCGACCGCGGCGGTGCCGGCACGCTGCAGGCCGTGCTGCTCAGGGCCGAGGTCGCCTCCGCCCGGATCCTGCGCCTCGATACCGCCAAGGCTCGCTCCATGCCCGGCGTGCGCGCCATCGTCACGGCCGAGGATGCGCCGGGCCGCCACGGCATCGGCATCGCCGACCACCCGCTCTTCGCCACCGGCTGCGTGCGCTATGACGGCGAGCCGCTCGCCGCGGTCGCCGCCGAGACGCTGGAGCAGGCCGAAGCTGCCGCCGCGGCCATCGCCGTCGAGCTCGAGCCGCTGCCCGCCGTCATCGAGATGGCGCAAGCGCTCACGCCCGATGCCCCGCTCGTGCACCCGGACTGGCGGGATTACGAGGTGCTGCTGGCAGGGGCGGCCCGGGCCGGCAATGTCGCCTGGGAGGCGACGGTGGTGCGCGGCGACGTCGATGCGGCCTTCGCCCGCGCGGATGTGACGATCGTCGACAGCGTCTTCCGGGTGGGGCGGCAGAACCACCTGTCCTTCGAGCCGCGCGCCGTCGTGGCTTCCTACGAGGACGGGCGCTTCCACATCGAGACCTCGACGCAGGTGCCCTGGTCGGTGCGTGCCACGACGGCGAAGCTCCTCGGCATCGCGCCCTCGCAGGTGCGCGTCACCGTGCCGGCGGTCGGCGGCGGCTTCGGCCTGAAGTTCGACTGCGCGCTCGAGCCCTTCGCCGCCTTGCTGGCCCGGGCCTCGGGGCGGCCGGTGAAGCTGGTCAATTCCCGGCGCGAGGAGATGCTGACCTGCCTCTGCCGCGAGAACGCCGAGATCCGCATCCGCTCGGCCGTCACGGCCGAGGGCGAGATCGTCGGCCGCGAGGCGGTGGTGCTGATGGACTGCGGCGCCTATGGCGGCGAGCAGATCTTCCTGACCACGATGACGGCGCACACGCTCGGCGGCAATTACCGGCTCGGCGCGGTGCGCCTGGCGAGCCGCGCCGTCTACACCAACACCGCGCCGAACGGCGCCTTCCGCGCCTGCAACGGCGTCTACAACACCTTCGCGCTGGAGCGGCACACCGACGAGATCTGTGCCGCCATCGGCATGGATCGCCTGGCCTTCCGCCGGCGCAACGTGCTGGGCGACGGCGATCTCGGGGCGACGGGCCAGGTGTTCGAGGGCGATGTCCTCGGCCCGATGCTCGATAAGATGGTGGCGCTGCGGGCGGAGAAGCCGTCGAGGGCGCCGCGCGCCGAGGGCCGGCTCCATGGCCGCGCCAGCGTGGTCGGCACCTGGTTCGTCTTCGTCGGGCCCTCGGCCGCCACCGTCAACCTCAACCCCGACGGCAGCGCCACGCTGGTCACCTCGGGCGTCGAGATCGGCTCGGGCTCGATGGTGCAGGCCCTGCCGCAGATCGTCGCCGCCGAGCTGGGACTCAAGCCCGAGGACGTCGTCGTCCGCACCGCCGACACCGATGCCGCCGGCTACGATGTCGGCGTCGGCGGCGGTCGGACCACGGTGTCGCTCGGCGCCGCCAGCACGGCGGCCTGCGTCGAGGTGCGCCGCAAGATGCTCAAGGTCGCCGCCGACATGCTGGAGACGGCGCCCGAGGACCTCGTCCTCGCCAAGGGGCGCGTCGAGATCGTCGGCATTCCCGGATCGGGCGTGACCATCGCCGAGATCGCCGCCCGCGCCCAGTCGCTCACCGGGCCGATCTCGGGCAGCGGCGCCTTCACCGGGCCGGGCGTCGCGGCGATGCCGGGCTGCGCCGCCGGCCATTTCATCGAGGCGCTGGATATCCCGGTCTTCGCCGTGCACGACTGCGAGGTTGCGGTCGACCCCGATACCGGCCATGTCGAGGTGCTGGCCTACACCGTGGTGCAGGATGTCGGGCGGGCGCTCAACCGCCGCGCCATTGCCGGGCAGATCCAGGGCGGGGTTGTGCAAGGTTTGGGCTACGCTTTGCATGAAGAGATGAGCATCGGCCCGGACGGGCGCATCCTGCAGTCGGGCCTGGAGACCTATCGCGTGCCGCTGGCCGAGGATGTCGTGCCGGTGGAGATCCATCTGCACGAGGGTGCCCCCTCGATCGGCCCGCTCGGCGTCAAGGGCGCCGGCGAGGTGCCGATCCTCAATGTCGGCGCGGCGATCGCCTGCGCCGTCGCCGACGCCACCGGCCGGCGCGTGCAGGAATTGCCGCTCACCCCGCCGCGCGTGCTGGCGCTGCTGCGGGAGCGGGAGGGGCCGCTCGAACTGGCGCATATCGCCAAGGATTGGCGAGAGAAGGTGCTGGGGTAG
PROTEIN sequence
Length: 783
MPDPAAATMDLPRRDARDKLQGRTRYTVDRGGAGTLQAVLLRAEVASARILRLDTAKARSMPGVRAIVTAEDAPGRHGIGIADHPLFATGCVRYDGEPLAAVAAETLEQAEAAAAAIAVELEPLPAVIEMAQALTPDAPLVHPDWRDYEVLLAGAARAGNVAWEATVVRGDVDAAFARADVTIVDSVFRVGRQNHLSFEPRAVVASYEDGRFHIETSTQVPWSVRATTAKLLGIAPSQVRVTVPAVGGGFGLKFDCALEPFAALLARASGRPVKLVNSRREEMLTCLCRENAEIRIRSAVTAEGEIVGREAVVLMDCGAYGGEQIFLTTMTAHTLGGNYRLGAVRLASRAVYTNTAPNGAFRACNGVYNTFALERHTDEICAAIGMDRLAFRRRNVLGDGDLGATGQVFEGDVLGPMLDKMVALRAEKPSRAPRAEGRLHGRASVVGTWFVFVGPSAATVNLNPDGSATLVTSGVEIGSGSMVQALPQIVAAELGLKPEDVVVRTADTDAAGYDVGVGGGRTTVSLGAASTAACVEVRRKMLKVAADMLETAPEDLVLAKGRVEIVGIPGSGVTIAEIAARAQSLTGPISGSGAFTGPGVAAMPGCAAGHFIEALDIPVFAVHDCEVAVDPDTGHVEVLAYTVVQDVGRALNRRAIAGQIQGGVVQGLGYALHEEMSIGPDGRILQSGLETYRVPLAEDVVPVEIHLHEGAPSIGPLGVKGAGEVPILNVGAAIACAVADATGRRVQELPLTPPRVLALLREREGPLELAHIAKDWREKVLG*