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berkeley_reactor_200306_biofilm_scaffold_4471_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(32687..33661)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9V3_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 8.50e-119
AraC protein {ECO:0000313|EMBL:BAQ50023.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 316.0
  • Bit_score: 463
  • Evalue 1.40e-127
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 2.40e-119

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Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGCGAGTGCGATACTCGACCGCGCAAGCGGCTCCGCATGCACGCAAGCGTTTTTGGGACGAAGCGATTTCGCGCACCTACTTTCCGCTGGACATGACCTTCCGCAACACGCCGACCTTCGCCGGAGACCTGCAGGCCTGGACGCTCGGCCATGTCTCCATCTCGCGCAATATCTCCGACGCGCTGCTCTATCGCCGCCACAAGCACCACCTGGTGCATGAGCGGGAGGAGAGCTACCTGATCACCGTCCCGGAGACGTCGGAGATCAGCTTCGTCCAGGACGGCAAGGACGTGAGCTGCAAGCCGGGCGCCTTCCTGGTGGAACGCAGCCACCTGCCCTACGAGTTCAGCCACGCCGAGGCCAACGCCCTGTGGGTGCTGAAGGTGCCGAGCGCCATCCTGCGCGCCCGCATCGGCCAGCCCGAGCGCCTGGCGACGCTGCGCTTCGATTCCACGCAAGGCGTCGGCGCCCTCTTCGTCGACCTGATCCGCCTCACCGCGGCGCGCGTCGAGGAGATGGACGAGACCGCCCGCGACGTCACGGGCAAGCACCTGGTCGACCTGATGGCGCTCGCCATCGACGCCGACGAGCGCGTGCTCGGCGGCAACGCCTCTTCTGTGCAGAGCGCGCATCTGAGACGGGCGGAACGTTTCATCCGCCACAACCTCGCCGATCCCGACCTGTCGCCGCAGATGATCGCCGAGGGCTGCGGCATCTCGGTGCGCTATCTCCACCAGCTCTTCGGCACGCAGGAGACCACCGTCTGCGCCTGGATGCGGCGCCAGCGCATCCTGATGTGCGACGAGGCCCTGCGCGATCCCGCCTGCCGCAAGTCGGTGTCCGAGATCGCCTATGACTGGGGCTTCGGCGACCAGGCCCAGTTCAGCCGGCACTATCGCTCGCAGTTCGGCTGCACGCCGACCGATGCACGCCGCGCCGCCCGCGGCGAGGAGCGCGCGCCCTCGCCGGCCTGA
PROTEIN sequence
Length: 325
MRVRYSTAQAAPHARKRFWDEAISRTYFPLDMTFRNTPTFAGDLQAWTLGHVSISRNISDALLYRRHKHHLVHEREESYLITVPETSEISFVQDGKDVSCKPGAFLVERSHLPYEFSHAEANALWVLKVPSAILRARIGQPERLATLRFDSTQGVGALFVDLIRLTAARVEEMDETARDVTGKHLVDLMALAIDADERVLGGNASSVQSAHLRRAERFIRHNLADPDLSPQMIAEGCGISVRYLHQLFGTQETTVCAWMRRQRILMCDEALRDPACRKSVSEIAYDWGFGDQAQFSRHYRSQFGCTPTDARRAARGEERAPSPA*