ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_5879_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9683..10594

Top 3 Functional Annotations

Value Algorithm Source
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Rhizobium sp. AP16 RepID=J2WB64_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 303.0
  • Bit_score: 532
  • Evalue 1.60e-148
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KEA08197.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 303.0
  • Bit_score: 534
  • Evalue 6.10e-149
dapAf3; dihydrodipicolinate synthase similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 303.0
  • Bit_score: 532
  • Evalue 6.10e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
TTGAGATTCGAGGGCATCTACACGCCCGCGGTGACGCCGCTGACGCCGGACGGGCAGATCGACAGACAAGCGTTCGCTGAGGTGCTGGAGCAACTGATCGAAGCGAAGATCCACGGCATCATCATCGGCGGCTCGACCGGTGAGTATTATGCGCACACCGCCCAGGAGCGCTTCGACCTCGCCGCCCACGCCAAGGACGTCATCGGCACGCGGCTGCCGCTGATCGTCGGCACCGGGGCGACGCGCACCGAGGACTCTGTCGCCTATGCGAAGGCCGCGCGGGCCATCGGCGCGGACGCCATCCTGGTCACCTCGCCGCCCTACGCGCTGCCGACCGAACGCGAGAATGCCGTGCACGCCCTGACGATCGACCGGGCGGCCAATCTGCCGATCATGCTCTACAACTATCCCGGACGCATGGGCGTCTCGATGGGCGAGGACTATCTCGCCCGGGTCGGCAAATCGAAGAACGTCGTCGCCATCAAGGAAAGTTCCGGCGACATGGGGCGCGTCCATCTCCTGGCGCGCGAGTTCCCGCATATCGGCCTGTCCTGCGGCTGGGACGACCAGGCCCTGGAGTTCTTCGCCTGGGGCGCCCGCAGCTGGGTCTGCGCCGGCTCCAATTTCCTGCCTCGCGAGCATGTCGCCCTCTACGAGGCCTGTGTCCTCGAGAAGAACTTCGACAAGGGTCGCCGCATCATGTCGGCGATGCTGCCGCTCATGAGTTTCCTCGACGGCGGCAAGTTCGTGCAGTCGATCAAGTTCGGATGCGAGCTGATCGGCCTCGACGTCGGGACTGTGCGGTCACCGCTTCGCCCTCTCAATTCCGAAGAAAAGCGCGCCCTGCAGACGGTGGTCGTCACGCTGAAGCGCACCGTTGCGCAAGTCACGTCCGGAGCGAACAATGGGTGA
PROTEIN sequence
Length: 304
LRFEGIYTPAVTPLTPDGQIDRQAFAEVLEQLIEAKIHGIIIGGSTGEYYAHTAQERFDLAAHAKDVIGTRLPLIVGTGATRTEDSVAYAKAARAIGADAILVTSPPYALPTERENAVHALTIDRAANLPIMLYNYPGRMGVSMGEDYLARVGKSKNVVAIKESSGDMGRVHLLAREFPHIGLSCGWDDQALEFFAWGARSWVCAGSNFLPREHVALYEACVLEKNFDKGRRIMSAMLPLMSFLDGGKFVQSIKFGCELIGLDVGTVRSPLRPLNSEEKRALQTVVVTLKRTVAQVTSGANNG*