ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_5879_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27979..28623)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DXQ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 214.0
  • Bit_score: 236
  • Evalue 1.30e-59
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 207.0
  • Bit_score: 267
  • Evalue 2.60e-69
TetR family transcriptional regulator {ECO:0000313|EMBL:AIB16068.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 207.0
  • Bit_score: 267
  • Evalue 1.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCCGGAGGATAATTCTAGAGTGATCATTGTGAAAAATGAGGCGCGGCCGCGCGGCCGCCCCCGCGCCTTCGACCGCGACCGGGCGCTGGCGGTGGCGGCGCGGGCCTTCTGGGATCGCGGCTACGAGGGCGTGTCGATCGCCGACCTCACGGCTGCCATCGGCATCACGCCGCAGAGCCTCTATGCCGCGTTCAAGTCCAAGGCGGACCTCTACCGCGAGTCGATCGCCTGGTATCAGGCCGGGATCGGCGCTCCCACCGCCCGGCTGCTGGCGGAGGAGCCGAGCGCGGTCGTCGCCTTCACCCGCGTGCTGGAGGAGATCGCCCGCCGCTTCACCCGGCCCGACCAGCCGCACGGCTGCATGGTGTCGACGGCCGTGCTGACCTGCGCCGCCGAGAACGAGCCGGTCGCCGAGCACGTCTCGTCCCTCAGGACCCGGGCGATCGCGGCCTTCCGCGCGCGGATCGAGAAGGCGGTGGCCGAAGGCGAGCTGCGCGGGGACACCGACGCGGCCGCGCTCGCCCGCTTTCTCGGCGCCGTCATCCAGGGCCTCTCGGTGCAGGCCCTGGACGGGGCTGATGAAGCCGAGCTCCTCCCCGTCGCCCGCATCGCCGCCGCCGAGGTCGCCCGCCACCGCGCCTGA
PROTEIN sequence
Length: 215
MPEDNSRVIIVKNEARPRGRPRAFDRDRALAVAARAFWDRGYEGVSIADLTAAIGITPQSLYAAFKSKADLYRESIAWYQAGIGAPTARLLAEEPSAVVAFTRVLEEIARRFTRPDQPHGCMVSTAVLTCAAENEPVAEHVSSLRTRAIAAFRARIEKAVAEGELRGDTDAAALARFLGAVIQGLSVQALDGADEAELLPVARIAAAEVARHRA*