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berkeley_reactor_200306_biofilm_scaffold_5879_36

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(38948..40108)

Top 3 Functional Annotations

Value Algorithm Source
Oxidoreductase n=3 Tax=Amycolatopsis mediterranei RepID=G0FML4_AMYMS similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 359.0
  • Bit_score: 375
  • Evalue 4.30e-101
oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 359.0
  • Bit_score: 375
  • Evalue 1.20e-101
Oxidoreductase {ECO:0000313|EMBL:AEK43159.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 359.0
  • Bit_score: 375
  • Evalue 6.00e-101

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGGCAAGGCTCGAGGTTCTGATCTCAGGAGCGGGAATTGCCGGTTGCACCCTCGCCTATTGGCTGGCACGCAACCGTCACGCCGTGACCGTCATCGAGCGCAGCGGCTCGCTTCGCTCGAGCGGCAGTCCCGTGGACGTGCGCGGGCTCGCAGCCGACGTGGCCGAGCGGATGAACATTGCCGCACGTCTGCGCGAGGCGAGCATCCGCCTGAAAGGAATGACTCTCCTGGACTCGGAAGGCCGGCGGGTCGCGCGCGTCGATATCGCCACGTTGCGATCCTCCATCGCGCCCAAGGACATGGAGGTTGCGCGCGGGGATCTCGCACGAATCCTTCATGAGGCAAGCGCCGGCGACGCCGACTACGTCTTCGGTGAGTCCATCACGGCTCTCGCCCAGGATGAAACGGGGGTGGATGTCACGTTCGAGCGTTCGCGTCCGCGGCGTTTCGATGTCGTCATCGGGGCGGACGGGTTGCATTCGATCGTCCGCCGACTGGCATTCGGAGCCGACTCCGAATTCGTCCGGCATGCCGGGCTTTACGCCGCGACGGTTTCCCTGCCCGGGAGCCGCGATGCGGCAGGCGAGATGTTCATGCTGAACGCGCCCGGAAAGCTGGCGGCACTCCATCCCTGCCAGGGTGTTCCACTCGCCTATTTCATTTTCTGGCGTCCAGAAATTCCCGGGTTCGACGACACGGACCTCGACCAGCACAAGCGCATTCTCGAGACGACCTTCGCCGGCATCGGCTGGAGAGTGCCGGAGTTCCTCGATGCCGTGCGCGGCGCGCGCGACATGTATTTCGACTCCGTCGCCCGGGTGGATGTCGCGAACTGGGGTCGCGGGCGGATCGCGCTGCTCGGCGATGCCTCGTCCTGCGTGTCGTTGTTCGGCGATGGATCGACCCTTGCCATCGCGGGGGCGCATGAGCTTGCAAAGGCGTTGACGGAAAGCCCGGCAGATCCGCAAGGCGCCTTCAGCCGTTACCAGGCCGTCCACGGCAAGCTCGTCGCCTCCAAGCAGAAAAATCTGATCTCCACGGCCTCCCGCATCGTGCCGAGGACCTCGGCCGGACTTTGGCTCAGCACGCGCGTGTTCTGGAGAACCATGGGTGGACTCGGTACCGTCGTGCGCCTGGGCCGGAAGCTGCGCGGACAATAG
PROTEIN sequence
Length: 387
MARLEVLISGAGIAGCTLAYWLARNRHAVTVIERSGSLRSSGSPVDVRGLAADVAERMNIAARLREASIRLKGMTLLDSEGRRVARVDIATLRSSIAPKDMEVARGDLARILHEASAGDADYVFGESITALAQDETGVDVTFERSRPRRFDVVIGADGLHSIVRRLAFGADSEFVRHAGLYAATVSLPGSRDAAGEMFMLNAPGKLAALHPCQGVPLAYFIFWRPEIPGFDDTDLDQHKRILETTFAGIGWRVPEFLDAVRGARDMYFDSVARVDVANWGRGRIALLGDASSCVSLFGDGSTLAIAGAHELAKALTESPADPQGAFSRYQAVHGKLVASKQKNLISTASRIVPRTSAGLWLSTRVFWRTMGGLGTVVRLGRKLRGQ*