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berkeley_reactor_200306_biofilm_scaffold_5879_39

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(42203..43408)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase S16 lon domain protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VCC4_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 393.0
  • Bit_score: 146
  • Evalue 4.40e-32
Strain MEJ076 contig_35, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98351.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 171.0
  • Bit_score: 158
  • Evalue 1.20e-35
peptidase S16 lon domain protein similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 393.0
  • Bit_score: 146
  • Evalue 1.20e-32

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGGCGAGAAGACGATCACGATCGGAACCGATGTCGCCACGCTCGTGCTCTTCCACCCCGACGATCTCCCCCACCGGCACGCCGACCCGATCGCCTGGTACGCCTATGACTTCGCCTATCGCCGCGAGTCGGCCGCGGGCCGTCTCGTCGCCTTCGGCACCGGCTCCGACGGCGGCTTTGCCGTCCGGCTGACCACGGGCGGCCTGACGCGGCGCGAGGCGGATCTCGCCTGCACGCCCTGGGCCTTCCCGCTCGTCGTGCGCCACGGGCGCATCCTGCTCGACAACACCGATGCCCTGCCCGGCGAGGAGCAGATGGTGCAGCCCGCGGCGCGGGAGAGCTGGTACGACATCGCCGAAGGCTCCTATCGCGCCACCGTCCATCCCATCGCGGCGGAAGAGGCGGGGCTGCCGGACTATGTCGTCACCTTCGAGCCGGTCGCCGACATCGCCGCCATCGCCGTGGCCGACACGCCGCCGGACCTGCGCCCGCTGCGCGGCCGGGAGCCCGCGCCGATGCCGGGCATGGCGACGGAGCACCAGTTCGAATGGCCGCGATCCGCGCCGGCCGAGGCCGAGGTCCCCGCTCTGCCCGTCGAGCCCGGCATCGCCGTGTTGCCGGGGCAGACCGTGCAGTTTCCGGTCTCGGACGCGGTCGCGGAAGCCGTCTTTCCTTCGGAGGGCGAGGGACTGGAAGCGCTGGTGCTGGCGCCGTCCTTCGCCGCCGGCGGCCTCGCGGTCCTCGCGGTGCCGAACCAGCTCTCGCGCCGGGGCGAGGAGCCGGCGGTGCTCGGCGTGGTCGGTCGCCATGTCGTGCGCATCCGGCGCGGCGCCCGGCCCCAGCCGCTGCACCCCCTCGCCGCCGCGCCCTTGGCCAAGCCCGCGATGGCGGCGGACGAGCGCAGCGTCGGCGCCTTCCGCGCCAGGCTGGCCGAGCATGCGGCGCGCGATGCCGCTTTCCGGTCGCGGCTGCAGCACCCGGCGTTCGAGACCGAGCGTTTCGCGTCCTTCGCCTCGGGCGAGGCGATGACGACCTGGGCGCTGATGCATCTCGACCTGCCCTTCCCCGACCGGCTCGCTCTTTATGCCAGCCCCCTCCGCGAGCGGATCGCCGGGCTGGAGCGCATCCTCGACGGCGACGGGCCGGGCCCGGACAGGCCGCCCTCGGCCATCGCCAGGCTGATGGAGCGGCTGTGGCGCCGGTGA
PROTEIN sequence
Length: 402
MGEKTITIGTDVATLVLFHPDDLPHRHADPIAWYAYDFAYRRESAAGRLVAFGTGSDGGFAVRLTTGGLTRREADLACTPWAFPLVVRHGRILLDNTDALPGEEQMVQPAARESWYDIAEGSYRATVHPIAAEEAGLPDYVVTFEPVADIAAIAVADTPPDLRPLRGREPAPMPGMATEHQFEWPRSAPAEAEVPALPVEPGIAVLPGQTVQFPVSDAVAEAVFPSEGEGLEALVLAPSFAAGGLAVLAVPNQLSRRGEEPAVLGVVGRHVVRIRRGARPQPLHPLAAAPLAKPAMAADERSVGAFRARLAEHAARDAAFRSRLQHPAFETERFASFASGEAMTTWALMHLDLPFPDRLALYASPLRERIAGLERILDGDGPGPDRPPSAIARLMERLWRR*