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berkeley_reactor_200306_biofilm_scaffold_5879_45

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(47491..48558)

Top 3 Functional Annotations

Value Algorithm Source
Aromatic amino acid beta-eliminating lyase/threonine aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWZ4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 344.0
  • Bit_score: 226
  • Evalue 3.90e-56
aromatic amino acid beta-eliminating lyase/threonine aldolase similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 344.0
  • Bit_score: 226
  • Evalue 1.10e-56
Aromatic amino acid beta-eliminating lyase/threonine aldolase {ECO:0000313|EMBL:ABS64427.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 344.0
  • Bit_score: 226
  • Evalue 5.40e-56

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGTACGATCTGCGCAGCGACGTGCTCGCCCCTCTCGCCCCCGCCGTGCTCCAGGCCCTCGCGGCGGCGGCGCAGCGCCAGCCCGGCTTCGGCCGGCACGAGGACGAGGAGGAGCGGCGCCTCGTCCGCGAGGCCGCCGACCTCTGCGGCTTCGAGGACGGGTTGTTCGTGCCGACCGGCACGCTCGCCAACCAGATCGCCCTGCGCCTGTGGTGCGCGCCCGGCGAGGCGGTGCTCGCCGAGCGTGAAAGCCACGTCGCCGTCAACGAGGTCGCCGCGACCGCGGCGCTCAACGGCGTGGTGGTGCGGCCGGTCGAAGGCCGGCGCGGCCACCTGGCGCCGGCCATGGTGGAGGCGGCGCTCGCCATCCGCTCGGGCTCGGCGAGCGAGCGGCGGACCCGGCTCGTCTGGCTGGAGAACACGCACAACCGCGCCGGCGGCACGGTCATGCCGGCCGGCTGGCTGGACGGGATCGCCGCGATCTGCCGCGGCCGCGGCCTGCACCTGCACGTCGACGGCGCGCGCATCTGGCACGCGGCGGTCGCGGCCGGCACGGCGCCGGCGGAGGCGGTGCGCGGCGCCTCCAGCGTCATGGTCGGCCTCAACAAGATCCTCGGCGCGCCCGTGGGAGCCCTGCTGCTCGCCTCCCGGGACGCCATCGACGAGGCCGCGCGGATCCAGAAGATGTTCGGCGGGCTCTGGCGCCCGGTCGGCCCGCTCGCCGCCGCGGCCCGCGTCGCCCTCGCCGGCTATCGGCCGCGGGCGAAGGCCGCGCACGAAGCCGCCGCGGTCTTCGCCGCGCGCCTCGCCGCGGAGCTGGGCAACGCGGTCTGCGATCCCGTCCCCGACACCAACATCGTCATGCTGGATTTCGGCGGGGAGGCCGCCGTCGACGCCCTGCTGACGCGCCTCTCGGACCAGCCCGTGCGGGTCGCGCCCTATCGCAACGGCCGCGTGCGCTGCGTGCTGCATGCCGGGCTGTCGCCCCGGGACGCCCGGGACGCGGCCGAGCTGATCTGCCGGGCCGCGCCGGATGCGCCGGACCAGGCTTGCGGAGACGGACCATGA
PROTEIN sequence
Length: 356
MYDLRSDVLAPLAPAVLQALAAAAQRQPGFGRHEDEEERRLVREAADLCGFEDGLFVPTGTLANQIALRLWCAPGEAVLAERESHVAVNEVAATAALNGVVVRPVEGRRGHLAPAMVEAALAIRSGSASERRTRLVWLENTHNRAGGTVMPAGWLDGIAAICRGRGLHLHVDGARIWHAAVAAGTAPAEAVRGASSVMVGLNKILGAPVGALLLASRDAIDEAARIQKMFGGLWRPVGPLAAAARVALAGYRPRAKAAHEAAAVFAARLAAELGNAVCDPVPDTNIVMLDFGGEAAVDALLTRLSDQPVRVAPYRNGRVRCVLHAGLSPRDARDAAELICRAAPDAPDQACGDGP*