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berkeley_reactor_200306_biofilm_scaffold_5879_48

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(50135..50806)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHU5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 216.0
  • Bit_score: 145
  • Evalue 5.40e-32
ABC transporter, permease protein {ECO:0000313|EMBL:EFH13126.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 216.0
  • Bit_score: 145
  • Evalue 7.60e-32
polar amino acid ABC transporter, inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 210.0
  • Bit_score: 143
  • Evalue 5.90e-32

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCCGGCGAGGGCGCGGACATCGTCCACACGCTATGGGCCGGCCGGCACGCGGTGCTCGCCGGCCTCGAGGTCACGGGCCTGATGGCCGGCGGCGGGCTGGCGCTCGGCCTCGGCATCGCCGCCCCGCTCGCCGTCGCCGGCGTGTTCGGGCCACGCCTCCTGCGCCTGGCTGTCGGGCTCTACGTCTTCGTCCTGCGCGGCACGCCGCTGCTCGTCACCCTGCTGTTCCTGTTCTTCGGCCTCGGCGCCGTCTGGCAGGCGCTGCCGGCCATGCTCGCCGCCGCGCTGGCGATGGGCCTCTATGCCGGCGCCCATCTCACCGAGATCTTCCGCGGCGCGATCCAGTCGATCCCGGCCGCGCAGATCGACGCGGCCAAGGCGGTGGGCCTGCCGTTCTGCGCGCGCCTCACCGCGGTGGTGGCGCCGTTGTCGCTTCCCCGCGCCCTCCCCTCCGTCACCAACGTCGCCGCCGACATGGTGAAGGCGTCGACGCTGGTCTCCGCCCTCGGCGTCGGCGACCTCCTGATGACGGGCCAGGACATGGCCATGCGCACGCTCTTGATCCCGCAGGTCTACATCACGCTCTGGGCCGCCTATCTCGCCATCAATCTCAGCCTCGGCGCCGTCGGCCGCTGGCTGGAGGGACGGTTTCGCCATGTCGTCTATTGA
PROTEIN sequence
Length: 224
MAGEGADIVHTLWAGRHAVLAGLEVTGLMAGGGLALGLGIAAPLAVAGVFGPRLLRLAVGLYVFVLRGTPLLVTLLFLFFGLGAVWQALPAMLAAALAMGLYAGAHLTEIFRGAIQSIPAAQIDAAKAVGLPFCARLTAVVAPLSLPRALPSVTNVAADMVKASTLVSALGVGDLLMTGQDMAMRTLLIPQVYITLWAAYLAINLSLGAVGRWLEGRFRHVVY*