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berkeley_reactor_200306_biofilm_scaffold_5879_49

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(50809..51477)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHU4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 217.0
  • Bit_score: 215
  • Evalue 4.30e-53
ABC transporter, permease protein {ECO:0000313|EMBL:EFH13125.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 217.0
  • Bit_score: 215
  • Evalue 6.00e-53
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 217.0
  • Bit_score: 180
  • Evalue 3.30e-43

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCAGGGCTATCGCTTCGACTGGACCGTGGTCTGGCAATACCGCCAGGCCCTTGCGCAGGCGCTGGCGCTCAGTCTCGAGCTCGCGGCCGCCTCGCTCTCGATCGGCCTCGTGCTGGGCCTCGGCTTCGCCTGGCTGTCGCAATCGCGGCGCCGCTCTCTCCGCGGCCTGGCGCACGCCTATGTGGCGACCGCACGGAGCACGCCGCTGCTGCTCCTGGTCTTCCTGGTCTATCTCGTGCTGCCGCAATACGGGCTGCGCGGCCTCACGGCGAACCAGACCTTCGTCGCTGCGCTCTCCGTCACGGCCGGCGGCTATCTCTGCGAGAACTTCCGCTCCGCCTTTGCCTCCATGCCCCGGGCCTATCTCGACAGCGCCCGGGCGATCGGCCTCACCGCGTGGCAGCGCCAGGTCCATGTCGTCCTGCCCATCGCCCTGCGCTACGCCTTGCCGTCCCTGACCAACAGCGCGGTCTCGGTCTTCAAGGACACGTCGATCGCCTCGATGATCTCGGTCCGGGAGCTGACGTTCACGGCGCGCGAGATCAGCACCAACTTCTTCCGCGTCTTCGAGGCCTGGTTCGTGGTCGCCGGCCTCTATCTCGCGGTCTCGACGCTGATGGCCCTCCTCGCCCGCCGCCTCGAGCGGCGGATGCCGAGACTGTCGTGA
PROTEIN sequence
Length: 223
VQGYRFDWTVVWQYRQALAQALALSLELAAASLSIGLVLGLGFAWLSQSRRRSLRGLAHAYVATARSTPLLLLVFLVYLVLPQYGLRGLTANQTFVAALSVTAGGYLCENFRSAFASMPRAYLDSARAIGLTAWQRQVHVVLPIALRYALPSLTNSAVSVFKDTSIASMISVRELTFTAREISTNFFRVFEAWFVVAGLYLAVSTLMALLARRLERRMPRLS*