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berkeley_reactor_200306_biofilm_scaffold_5879_50

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(51499..52383)

Top 3 Functional Annotations

Value Algorithm Source
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3E0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 289.0
  • Bit_score: 290
  • Evalue 1.80e-75
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31531.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 276.0
  • Bit_score: 291
  • Evalue 1.10e-75
amino acid ABC transporter similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 266.0
  • Bit_score: 280
  • Evalue 5.30e-73

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCCGAACCAGCCCCTGGATCGTCGCGCGCTCCTCGGCGCGTCCCTGCTCGCCGGCATGGGAGGCGCCGCCCTCGCCCTGCCCGCCGCGGCGCAGTCGAGTGCCGGCGCCGCCGGCGACGACAAGCTGCAGGAGGTGCTCTCGCGCGGGCACCTGATCGTGGGAACGGGCACCGACATTCCGCCCTTCTACTTCCGGCAGGAGAACGGCGACCTCGCCGGCTTCGAGATCGACCTCGCCCGTCTGCTGGCAAAAGGCCTGTTCAACGATCCCGGCAAGGTCGAGTTCGTGACGCAGACCTCCGATGCGCGCATTCCGAACCTGCTCGCCAACCGCATCGACCTCACCATCCAGAACCTCACCGTCACCGCCGGCCGCGCCCTGCAGATCGATTTCACCGTGCCCTATTACCGCGACGGCCAGGGCTTCCTGCTGAGGGCCGACGGCCGCTACCGGGATTTCGCGGCGCTGAAGGCCGCCGGCGCGGACACGACCATCAGCGCCATCCAGAACGTCTTCATCGAAAGCTGGATCCGGGAAGTGCTGCCGGACGCGAAGGTGGAGCAGTTTGCCACGCCGGATGCCGCCCTGCAGGCCCTCAACGCCGGCCGCGCCGACGCCCACTACATCACCTATAGCCGCATTCCCTGGACCTTGAAGCAGCTTCCCGGCCGCTACCTCGACAGCGGCTTTTCCCATCGCGCCGGATCGGTCGCCTGCGGCATCCGGCAGGGCCAGCCGCGCTGGCTGAGCTTCCTCGACACCGCGCTGCGCGAAGCGATGACCGGCGTCGACTTCGCCGCCTATGCCGCTCTGTTCAAGACCTGGCTCGACACCGACCTGCCCGCGCCCAGGACCGGCCAGCCCCACGAATTCGCCGCCTGA
PROTEIN sequence
Length: 295
MPNQPLDRRALLGASLLAGMGGAALALPAAAQSSAGAAGDDKLQEVLSRGHLIVGTGTDIPPFYFRQENGDLAGFEIDLARLLAKGLFNDPGKVEFVTQTSDARIPNLLANRIDLTIQNLTVTAGRALQIDFTVPYYRDGQGFLLRADGRYRDFAALKAAGADTTISAIQNVFIESWIREVLPDAKVEQFATPDAALQALNAGRADAHYITYSRIPWTLKQLPGRYLDSGFSHRAGSVACGIRQGQPRWLSFLDTALREAMTGVDFAAYAALFKTWLDTDLPAPRTGQPHEFAA*