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berkeley_reactor_200306_biofilm_scaffold_5879_55

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 55398..56222

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7U7_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 273.0
  • Bit_score: 402
  • Evalue 1.80e-109
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM33548.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 273.0
  • Bit_score: 421
  • Evalue 6.80e-115
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 273.0
  • Bit_score: 402
  • Evalue 5.00e-110

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAACAGAACGGCCCTGGTGACGGGCGCCTCGTCGGGCATCGGCGAAGCGACGGCAAAGGCTTTGCTGGCCGACGGCTACACCGTCTATGCGGCGGCGCGGCGCCTCGACCGCATGGCGGGGCTCGCCGCCGCCGGCGTGCGTCCGATCGCCCTCGACCTCATCGACGATGCCTCGATGGTCGCCGCGGTGGAGAAGATCCTCGGCGAGACCGGCCGCATCGACGTGCTGGTCAACAATGCCGGCTATGGCAGCTACGGCGCCCTGGAGGACGTGCCGCTCGAAGAGGCGCGCCGCCAGTTCGAGGTCAACCTGTTCGGCGCCGCCCGGCTCTGCCAGCTGGTGCTGCCGGCGATGCGGACGCAGAAGGGCGGCCGGATCGTCAATGTCAGCTCGATCGGCGGCAAGGGCGGCGAGCCTTTCGGCGCCTGGTACCACGCCACCAAGTTCGCGCTGGAGGGCCTCAGCGACAGCCTGCGCATGGAACTGATCCCCTTCGGCATCGACGTGATCGTGATCGAGCCCGGCGCCATCCGCACCGAATGGGGCGGCATCGCCCACGAGAGCATGCTGCGCATGTCCGGCGACACGGCCTACGGCCCCTATGCCCGCCGCCATGCCCGGCTGCACGAACGGGCCGGAACGCGCATGGCCTCCCCACCGGAGGTCGTCGCCCGCATCATCGCCCGGGCCGTCGCCTCGAAGCGCCCGCGCACGCGCTATCCCGCCGGCGGCGGGGCGCGCTGGATCCTGCTGATCCAGCGCTTCCTGACCGACCGGATGCAGGACCGGCTGATGTGGCGGGTGTCGCAGGGCGGGGCGTAG
PROTEIN sequence
Length: 275
MNRTALVTGASSGIGEATAKALLADGYTVYAAARRLDRMAGLAAAGVRPIALDLIDDASMVAAVEKILGETGRIDVLVNNAGYGSYGALEDVPLEEARRQFEVNLFGAARLCQLVLPAMRTQKGGRIVNVSSIGGKGGEPFGAWYHATKFALEGLSDSLRMELIPFGIDVIVIEPGAIRTEWGGIAHESMLRMSGDTAYGPYARRHARLHERAGTRMASPPEVVARIIARAVASKRPRTRYPAGGGARWILLIQRFLTDRMQDRLMWRVSQGGA*