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berkeley_reactor_200306_biofilm_scaffold_5879_62

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(60361..61227)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4P8_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 258.0
  • Bit_score: 324
  • Evalue 6.50e-86
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK56161.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 264.0
  • Bit_score: 356
  • Evalue 2.80e-95
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 258.0
  • Bit_score: 324
  • Evalue 1.80e-86

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Taxonomy

bacterium UASB270 → Bacteria

Sequences

DNA sequence
Length: 867
ATGTCCGCAAGCGAAATCACGCCGCCCCATCCTTTCGGAAGCAAGATCGCGCCGCAGCTCCGGAAGGCGGCGATCTACGCGGCCCTGATCATGCTGTCCGCCTTCTATCTCATGCCCGTCTACATGATGGTCGTGAACGGGATGAAGACCGCCACGGAAGTCTCGATCTCGACCATGTGGCAGTTGCCTGGCACGCTGGGGCTCGGCGGCTTCCGCGAAGCTTGGGCGAGACTGCAGTCATCGTTCCAAAATAGCCTGGAAATTACGATCTCCGCGACGGCCATTTCCTGCCTGATCGGATCTCTCACCGGCTATATCCTTTCACTCTGGCGCTTCAAGTGGGCGAATTTCGTTTCGATCTTGATCATATTCGGCATGTTCATACCCTATCAGAGCATTATCGTTCCGCTTGTCTTCTTCACGCAGAAGGTGGGTCTCTACGGCACTATTCCGGGACTGATCGTTGTCCATATCATCTACGGACAATCGATCAACGCTTTGATCTTCGGCAATTATTACCGAAGCGTGCCGCAGTCCCTGATCGAGGCGGCAAGGGTGGATGGCGCCGGTGTCTGGAAGGTATATTGGAAGATTATCCTGCCGCTTTCGCCGCCAGCCTTCGTCGTGGCAGCGATCTTTCAGTTCACCAACATCTGGAACGACTTCCTCTTTGGTGTAACGATCGTTCCAAATCCCCAGTCGCAGCCCATCACCGTGGCCTTGAACAATCTGTCCGGGAACTTCTCGGTCGACTGGAACGTGGTCATGGCCGGCGCGGTGATCGCCGCCCTGCCGACCGCCCTCGTGTACGTCGTGCTGGGACGCTATTTCGTGCGCGGCCTGGTCAGCGGCTCGGTGAAATCCTGA
PROTEIN sequence
Length: 289
MSASEITPPHPFGSKIAPQLRKAAIYAALIMLSAFYLMPVYMMVVNGMKTATEVSISTMWQLPGTLGLGGFREAWARLQSSFQNSLEITISATAISCLIGSLTGYILSLWRFKWANFVSILIIFGMFIPYQSIIVPLVFFTQKVGLYGTIPGLIVVHIIYGQSINALIFGNYYRSVPQSLIEAARVDGAGVWKVYWKIILPLSPPAFVVAAIFQFTNIWNDFLFGVTIVPNPQSQPITVALNNLSGNFSVDWNVVMAGAVIAALPTALVYVVLGRYFVRGLVSGSVKS*