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berkeley_reactor_200306_biofilm_scaffold_5879_66

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(64983..65936)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LK21_BURGS similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 315.0
  • Bit_score: 278
  • Evalue 4.50e-72
periplasmic binding s and sugar binding domain of LacI family protein similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 315.0
  • Bit_score: 281
  • Evalue 2.60e-73
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:AJW93932.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 315.0
  • Bit_score: 281
  • Evalue 1.30e-72

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Taxonomy

Burkholderia gladioli → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAACAATCCGGAAGTGGTCTCCCCGGACGTCAAGGAGCGGGTTCATCAGGCGATTCGGAAACTCAATTGGGTGCCGAATGCTTCCGCCAAGGCGCTTGCAACGAGCCGAACGCATACGATCGGCGCCATCATGCCGACGCTGGACCATCAGAACTTCGCCCGCATCGTCGAATCCCTGCAGACGACGATCGCATCGGCGAAGTACGAGCTCCTGGTCGGCGTCACGCATTATGCGCGAGAGGTTGCGACACATCAGGCCCAGGCGATGATCGAACGGGGCGTCGAGGCCCTGGTTCTTGTCGGAGCCGATCATCCCGAGGAACTGCTCGGCATGCTCGAGCACAAGGGAGTGCCCTACGTTCTCGTCTATGTCGCGCCGGGCACCGCTCCCGGTCGAAACGTCATCGGCTATGACAACTACCAATCCTTTGTGACGATCACGGAATACCTCCTTGATCTGGGGCACAGGTCCTTTGGTCTCATCGCACAGGACACGTCCTTCAATGATCGGGCGCGAGCGCGCCGGGAAGGCGTGAAGGACACGCTGGCTGAACGCGAGATTGCGATACGACCGCGCCATTTCATCGAAGGTGCGTGGAAGTTCGAAGACGGCATGAGGGCTTTCGAGAAGGTCATGCGCTCGGACGAGCCACCGACGGCCATCATCTGCGGGAACGATTACCTGGCGATCGGCTGCATGCTCAAGGCGTCCGAGATGGGCGTCGACATCCCCGGCGACGTCTCCATCACAGGGTTCGACGACATCGACCTGGCACGATTGCTTCCACCGGGCATCACGACGATGAAGGTGCCCGATGCGCTCGTCGGCGAGATGGCGGGTCGCTTCTTCATCGACGTCCTGCAGGGAAAGATCGGCCAGCTCGGAGCCGTGCCTGCGCCGGAGCTCATCGTGCGAGGATCGACCGCGCAACCGAGAAGCAGAAGAACTTAG
PROTEIN sequence
Length: 318
MNNPEVVSPDVKERVHQAIRKLNWVPNASAKALATSRTHTIGAIMPTLDHQNFARIVESLQTTIASAKYELLVGVTHYAREVATHQAQAMIERGVEALVLVGADHPEELLGMLEHKGVPYVLVYVAPGTAPGRNVIGYDNYQSFVTITEYLLDLGHRSFGLIAQDTSFNDRARARREGVKDTLAEREIAIRPRHFIEGAWKFEDGMRAFEKVMRSDEPPTAIICGNDYLAIGCMLKASEMGVDIPGDVSITGFDDIDLARLLPPGITTMKVPDALVGEMAGRFFIDVLQGKIGQLGAVPAPELIVRGSTAQPRSRRT*