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berkeley_reactor_200306_biofilm_scaffold_5879_70

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 69482..70447

Top 3 Functional Annotations

Value Algorithm Source
Dihydrodipicolinate synthetase family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X9Y7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 303.0
  • Bit_score: 166
  • Evalue 4.30e-38
dihydrodipicolinate synthetase family protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 303.0
  • Bit_score: 166
  • Evalue 1.20e-38
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 306.0
  • Bit_score: 183
  • Evalue 4.80e-43

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAAGCTCGACGGCGGCGTGTTGATCGCGAATATCACACCGTTCAAAGACAATCTCGAGGTCGATTGGAATGAAATGGCAAGGCGCACGCGCGACCTGGCATCCATCCCCGGCATCCAAGGCTTTGTGGTCAATGCCTTCGCGGCAGAAGCTCCGGCTCTGAGCCACGACGAGCGTCAGCGCGCCGTGGCCATTCACAAGGACAATATTCGGCCAGGCCAGACGGTGGTTGCTGCCATTCTCGACTGGGCCCCGCCGTCCACGATCCGTCGAGGCGAAGAAGCCGGAGAAGCCGGAGCCGACGCGGTCATGGTCTGCTCTCCCTATCTCTCTGCCTATAACGCAAACCACAGCCCGGAATATGCCTTCCACTTCCACAAGGAAGTCGCGGAAGGTCTGGACATGCCGATCGTCTTGTTCCAGCTCGCCTCGGGTGACCAGCTTTCCTATCCCCACGAGGCCCTCGTCAAGATGGCTTCGGAGATCGATCAGGTCGTCGGCGTCAAGATGGCGCAGGCGGCAGATTGCGTCCGCTATGACCGGGATTATTACGCTCTCAAGTCGCTGAACAAGGAGATCATTTGCCTCCCCTCCGTGGGATCGACGTTCTTCCACAACCTCTCGACCGGTGGCGACGGTATCCTTTCGGGGCTCGCCGCCTTTGCACCTTACGAGTGCGTCGAGATGCTCAACCTGGTGAAGAACGGGGATCTCAACCGGGCGCAAGCTCTGCACAGGCGCCTCGCGCCGCTTTGCCATGCGATCTATGGCTTCCCCTACGCGGATCTGCATACCCGCTACAAGGAAGTGGCTTACATGGTCGGAGCCCTTTCCTCTCCGGTGCTGCGGTCGCCCCAGTTGCGCATGAAGGCAGCGGAACTCGATCGTCTGTGGAGGGCGGCTCAGATCGCGGACTTGCGTCCGATCCCTGGCGCAGACGAGACCCGTCCTCGCTTGGCTGCCTAG
PROTEIN sequence
Length: 322
MKLDGGVLIANITPFKDNLEVDWNEMARRTRDLASIPGIQGFVVNAFAAEAPALSHDERQRAVAIHKDNIRPGQTVVAAILDWAPPSTIRRGEEAGEAGADAVMVCSPYLSAYNANHSPEYAFHFHKEVAEGLDMPIVLFQLASGDQLSYPHEALVKMASEIDQVVGVKMAQAADCVRYDRDYYALKSLNKEIICLPSVGSTFFHNLSTGGDGILSGLAAFAPYECVEMLNLVKNGDLNRAQALHRRLAPLCHAIYGFPYADLHTRYKEVAYMVGALSSPVLRSPQLRMKAAELDRLWRAAQIADLRPIPGADETRPRLAA*