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berkeley_reactor_200306_biofilm_scaffold_5879_79

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(79794..80828)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Kaistia granuli RepID=UPI000381AAFA similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 337.0
  • Bit_score: 591
  • Evalue 3.40e-166
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ETA71684.1}; Flags: Precursor;; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 343.0
  • Bit_score: 549
  • Evalue 2.70e-153
spermidine/putrescine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 343.0
  • Bit_score: 547
  • Evalue 2.10e-153

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGATCGGATTGAAGCATCTCTCGTTGAAGCATCTTTTGGGCGCCGCCGCGCTCGCGGCCGGCCTGTGGGCCACGGCGGCCAGCGCCGAGACCCTGCGCGTCCTCGCCTGGGAAGGCTATGCCGACCCCGACTGGGTGAAGGACTTCACCAAGGAGACCGGCATCGACGTCAATGTCGTGTTCATCGGCAGCGACGACGAGATCTGGGCCAAGATCAAGGGCAGCGAGGGCAAGGACTTCGACGTCATGGCCGTCAACACGGCCCAGCTGCAGCGTTATATCGACGCCAAGCTGGTGACGCCCTGGGACCTCTCGGCCATTCCCAACCAGCAGGAGGTCTTGCCGCGCTTCCGTGACCTCGCCGCCATCAAGGGCGAGACCCGCGACGGCAAGGTCTACGGCATCCCCTTCTGCTTCGATTCCATCGGCCTGATCTACGATACGGACAAGGTCAAGCCCGCCCCGACCTCGATGTCGGTGCTGTGGGACCCGAAATACCAGGGCAAGGTGCTGGCCTATGACAATGGCGAGCACAATTTCTCCTTCACCGCCCTGACCATGGGCGTCGCCGACCCCTTCCACCTCTCGGCAGACCAGCTCGCCGCCGCCAAGGCCAAGCTGATCGACCTGAAGAAGAACGTGCTGAGCTTCTACACCACCGCCGATGAAGCCCAGCAGATCTACCAGAACAACGACGTGGCGCTGATCTGGGCCAATTACGGCCAGCAGCAGCTCAAGGCCCTGCAGAAGGTCGGCGCGCATGTCGCCTACATCAACCCGTCGGAAGGCGCCCTCTCCTGGCTCGACAACTGGGCGATGACCAGCGGCGTCAAGGACAAGGCCGCGGCGGAGAAATGGGTGAACTTCCTCCTGCAGAAGAAGATCGGCACCGCCCTCTCCGAGCGCACCGGCTTCGGCAACACGGTGGTGGCGAGCGCCAGCGCCAACGAGGGCGACAAGCTGGTCTGGCTCGACTCGGTGGAGGACCCGCTGAAGCGCTCGGACTTGTGGAACGAGGTCAAGGCCGCGCCGTGA
PROTEIN sequence
Length: 345
VIGLKHLSLKHLLGAAALAAGLWATAASAETLRVLAWEGYADPDWVKDFTKETGIDVNVVFIGSDDEIWAKIKGSEGKDFDVMAVNTAQLQRYIDAKLVTPWDLSAIPNQQEVLPRFRDLAAIKGETRDGKVYGIPFCFDSIGLIYDTDKVKPAPTSMSVLWDPKYQGKVLAYDNGEHNFSFTALTMGVADPFHLSADQLAAAKAKLIDLKKNVLSFYTTADEAQQIYQNNDVALIWANYGQQQLKALQKVGAHVAYINPSEGALSWLDNWAMTSGVKDKAAAEKWVNFLLQKKIGTALSERTGFGNTVVASASANEGDKLVWLDSVEDPLKRSDLWNEVKAAP*