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berkeley_reactor_200306_biofilm_scaffold_5879_81

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(81722..83452)

Top 3 Functional Annotations

Value Algorithm Source
L-arabonate dehydratase {ECO:0000313|EMBL:CDX28926.1}; EC=4.2.1.25 {ECO:0000313|EMBL:CDX28926.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 574.0
  • Bit_score: 979
  • Evalue 1.00e-282
Dihydroxy-acid dehydratase (EC:4.2.1.9) similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 576.0
  • Bit_score: 966
  • Evalue 2.40e-279
dihydroxy-acid dehydratase n=1 Tax=Kaistia granuli RepID=UPI000362F8A7 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 576.0
  • Bit_score: 1055
  • Evalue 0.0

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGCAGACGAGCGACGCAAGCTGCGGTCCACCGCCTGGTTCGGCGGCTCCGGCAAGAACGCCTTCATGCATCGCAGCTGGATGAAGAACGAAGGCCATCCGCCCGACGTGTTCGACGGACGCCCGGTGATCGGCATCTGCAACACCTGGTCGGAGCTGACGCCCTGCAACGCGCATCTGCGCGGCCTCGCCGAGCACGTGAAGCGCGGCGTCTACGAGATGGGCGGGCTGCCGCTGGAATTCCCCGTCATGTCGCTGGGCGAATCCAACATGCGCCCGACCGCCATGCTGTTCCGCAACCTCGCCAGCATGGACGTGGAGGAATCGATCCGCGCCAACCCGATCGACGGCGTCATCCTGCTGGTCGGCTGCGACAAGACCACGCCGGCCCTGCTGATGGGCGCGGCGAGCTGCGACCTGCCGACCATCGCCGTGTCCGGCGGACCGATGCTGAACGGCAATTTCCGCGGCAAGCCGATCGGCTCGGGCACCCATGTCTGGAAGTTCTACGAGGACGTGAAGGCCGGCCGCATGTCGGTCGACGACTTTCTCGCCGCCGAGCAGGGCCAGAGCCGCTCGGCCGGCAGCTGCATGACCATGGGCACGGCCTCGACGATGGCCAGCATGGTCGAGGCGCTCGGCATCGCCATGCCCGACAACGCCGCCATCCCGGCGGTGGATTCGCGCCGGGCCATCCTGGCGCAGGAGGCGGGCCGGCGCATCGTCGCGCTGGTGCGCGAGGACGTGCGCATGTCGCAGATCCTGCGCCGCCCGGCCTTCGAGAACGCCATCCGCGTCAACGGCGCCATCGGCGGCTCGACCAATGCGGTCATCCATCTCATCGCCGTGGCGCGGCGCCTCGGCGTCGACCTCTCCCTCGACGACTGGGACCGGCTCGGCCGCGACGTGCCGACCATCGTCGACCTGATGCCATCGGGCCGATTCCTGATGGAGGACTTCTACTATGCCGGCGGCCTGCGCGCGGTGATGCGCGCGATGGCCGAAGCCGGCCTCATCCATGCCGACGCGCCGACCGTCGCGGGCCCGAGCATCGGCGAGATCATCCGCGATGCGCCCTCCTACAACGGCGAGGTGATCCGCAGCCTCGACGCCCCGCTGACGCCCCAGGGCGGCATCGCCGTGCTGCGCGGCAACCTCGCCCCCGGCGGCGCGGTGATCAAGCCCTCGGCCGCCACCCCGGCGCTGATGCAGCACACCGGCCGTGCCGTGGTGTTCGAGACCATCGAGCACTACTACGCCCGCATCGACGATCCCGCGCTGGAGATCGACGAGAGCTCGATCATGGTGCTCAAGAACTGCGGCCCGAAGGGCTATCCCGGCATGGCCGAGGTCGGCAACATGCCCCTGCCGGCCAAGCTCTTGCAGCGCGGCGTCACCGACATGGTGCGCATCTCCGACGCGCGCATGAGCGGCACCGCCTACGGCACCGTGGTGCTGCACACCGCGCCGGAGGCAGCCGCCGGCGGCCCGCTCGCCCTGGTGCGCGACGGCGACCTCATCACGCTCGACGTCGCCGGGCGGCGCCTGCATCTCGACGTCTCCGACGAGGAGCTCGCGGCGCGCCGGCGCGACTGGCGCCCGCCGGCGAACCCGGGCGCCACCGGCTACCAGAAGCTCTTCGTCGAGCATGTCCTGCAGGCGGACGAAGGCTGCGACTTCGACTTCCTCACCGGCCGGCGCGAGGCCGGCATCCCCCGCCATTCCCATTGA
PROTEIN sequence
Length: 577
MADERRKLRSTAWFGGSGKNAFMHRSWMKNEGHPPDVFDGRPVIGICNTWSELTPCNAHLRGLAEHVKRGVYEMGGLPLEFPVMSLGESNMRPTAMLFRNLASMDVEESIRANPIDGVILLVGCDKTTPALLMGAASCDLPTIAVSGGPMLNGNFRGKPIGSGTHVWKFYEDVKAGRMSVDDFLAAEQGQSRSAGSCMTMGTASTMASMVEALGIAMPDNAAIPAVDSRRAILAQEAGRRIVALVREDVRMSQILRRPAFENAIRVNGAIGGSTNAVIHLIAVARRLGVDLSLDDWDRLGRDVPTIVDLMPSGRFLMEDFYYAGGLRAVMRAMAEAGLIHADAPTVAGPSIGEIIRDAPSYNGEVIRSLDAPLTPQGGIAVLRGNLAPGGAVIKPSAATPALMQHTGRAVVFETIEHYYARIDDPALEIDESSIMVLKNCGPKGYPGMAEVGNMPLPAKLLQRGVTDMVRISDARMSGTAYGTVVLHTAPEAAAGGPLALVRDGDLITLDVAGRRLHLDVSDEELAARRRDWRPPANPGATGYQKLFVEHVLQADEGCDFDFLTGRREAGIPRHSH*