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berkeley_reactor_200306_biofilm_scaffold_10611_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(30529..32382)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 620.0
  • Bit_score: 1042
  • Evalue 0.0
phosphomethylpyrimidine synthase n=1 Tax=Methylopila sp. M107 RepID=UPI00036E1A1F similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 623.0
  • Bit_score: 1045
  • Evalue 0.0
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 625.0
  • Bit_score: 1036
  • Evalue 0.0

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1854
ATGAACACGCATACGCGCCTGCCGAAGAAATCGCTGAAATCCACGCCGGACACCGTCACGACCGGCCCGATCGCCGGCTCGCGCAAGGTCTACGCCGCCCCGGCCTCGCATCCCGCCATGCGGGTGCCGCTCCGCGAGATCGCGCTGTCGGACCCCGGCGAGAGCCCGGTCCGCGTCTACGATTCCTCCGGGCCCTACACCGACGGCGATGCCTCGATCGACCTCAGGCAGGGCCTGCCCCTGGTCCGGCAGGCCTGGATCGCCGCCCGCGGCTTCGCGGAGGTGGCCGGCCGCGCCGTGCGGCCGGAGGACAACGGCCATGTCGGGGCCGACCATCTCGTCGCCCCCTGCCCGGCCCGCCGCACCCTGCAGGCCGGCCAGCCCGGCCAGCGCGTCACCCAGTACGAGTTCGCCCGCGCCGGGCTGATCACCGAGGAGATGGTCTACGTCGCCCATCGCGAGAATCTCGGGCGCGAGGCCGCGCTGGCCGGAGCGCGGGAGCGGCAGGCCGACGGCGAGAGCTTCGGCGCCGCGATCCCGGACTTCGTCACGCCCGAGTTCGTCCGCGACGAGATCGCCCGCGGCCGGGCGATCATCCCGGCCAACATCAACCATCCCGAGCTGGAGCCGGTGGCGATCGGCCGGAATTTCCTGGTCAAGGTCAACGCCAATATCGGCAATTCGGCCCTGTCCTCCGGTGTGGCCGAAGAGGTGGAGAAGCTGGTCTGGGCCATCCGCTGGGGTGCCGACACGGTGATGGACCTCTCCACCGGGCGCAACATCCACAACATCCGCTCCTGGATCCTGCGCAATTCGCCGGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCGGCGGCGATCCCGTCAAGCTCGACTGGGACGTCTTCAAGGACACGCTGATCGAGCAGGCCGAGCAGGGCGTCGACTATTTCACCATCCATGCCGGCGTGCGGCTCGCCCATGTGCCGCTGACCGCCAGCCGCGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGCGCTGGTGCCTCGCCCATCACAGGGAGAGCTTCCTCTACGAGCGCTTCGCCGACATCTGCGACATCATGCGCCGCTACGACGTCTCCTTCTCGCTCGGCGACGGGCTGCGCCCCGGCTCGATCGCCGACGCCAACGACGCGGCCCAGTTCGCCGAGCTGGAGACGCTGGGCGAGCTCACCCGCATCGCCTGGGACAAGGGCTGCCAGGTGATGATCGAGGGCCCGGGCCACGTGCCCATGCACAAGATCAAGCACAACATGGACAAGCAGCTCGCCACCTGCGGCGAGGCGCCGTTCTACACGCTCGGCCCGCTGACGACGGATATCGCGCCGGGCTACGACCACATCACCTCGGGGATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCCATGCTCTGCTACGTCACGCCCAAGGAGCATCTCGGCCTGCCCGATCGCGACGACGTCAAGACCGGCGTCATCACCTACAAGATCGCCGCCCATGCCGCCGACCTCGCCAAGGGTCATCCCGCGGCGAAGCTGCGCGACGACGCGCTGTCGCGCGCCCGCTTCGACTTCCGCTGGGAAGACCAGTTCAACCTGTCGCTCGATCCCGACACGGCCCGCGCCTTCCACGACGCGACCCTGCCCAAGGACGTGCACAAGGTGGCGCATTTCTGCTCGATGTGCGGGCCCAAGTTCTGCTCGATGCAGATCACCCAGGAGCTGCGCAAGGAAGCGAAGGCGCTGGAAGCGGAGGCTCTGGCCGGCATGGCCGAGAAGGCGCGCGAGTTCCGGGAGGGCGGCGGCGCGCTCTACGTCCCCGCCGCGGAGTGA
PROTEIN sequence
Length: 618
MNTHTRLPKKSLKSTPDTVTTGPIAGSRKVYAAPASHPAMRVPLREIALSDPGESPVRVYDSSGPYTDGDASIDLRQGLPLVRQAWIAARGFAEVAGRAVRPEDNGHVGADHLVAPCPARRTLQAGQPGQRVTQYEFARAGLITEEMVYVAHRENLGREAALAGARERQADGESFGAAIPDFVTPEFVRDEIARGRAIIPANINHPELEPVAIGRNFLVKVNANIGNSALSSGVAEEVEKLVWAIRWGADTVMDLSTGRNIHNIRSWILRNSPVPIGTVPIYQALEKVGGDPVKLDWDVFKDTLIEQAEQGVDYFTIHAGVRLAHVPLTASRVTGIVSRGGSIMARWCLAHHRESFLYERFADICDIMRRYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTRIAWDKGCQVMIEGPGHVPMHKIKHNMDKQLATCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKTGVITYKIAAHAADLAKGHPAAKLRDDALSRARFDFRWEDQFNLSLDPDTARAFHDATLPKDVHKVAHFCSMCGPKFCSMQITQELRKEAKALEAEALAGMAEKAREFREGGGALYVPAAE*