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berkeley_reactor_200306_biofilm_scaffold_10611_59

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(59965..60810)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BT4_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 264.0
  • Bit_score: 228
  • Evalue 8.00e-57
Uncharacterized protein {ECO:0000313|EMBL:KDR86597.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 163.0
  • Bit_score: 250
  • Evalue 1.60e-63
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 264.0
  • Bit_score: 228
  • Evalue 2.30e-57

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGTCGTCGTCCATGTCGGCCCGCCCGCTGGCCGGCCTCGCCCAGCGCGGCCTCGGGCTCCTCGTCGCCGCCGTCGTGCTCGGCCCGATCGCCTGGGGCCTGGCGACCTCGCTGAAGACCGAGGTGATGGCCGTCGCTTTGCCGCCGACCATCATCCCCTCCCCGCTCACCTTCGAGAACTATCTCGGCGTCCTCGCCTATCAGGGCTTCCTCCTCGAATTGTGGAACTCGACGCTCTACGCCGTCGGCGCGGTGCTGGTGGCGCTGCTGGTCGGCATTCCTGCCGGCTATGCCGCCTCGCGCTTCGATTTTCCGGCCAAGAAGCTCGTGATGATGGTGATCCTGGCGACGTCGATGGTCCCCGGCGTCGCCGTGCTCGTGCCGACCTACTACGTGCTCGACGCGTTCGGCCTGCTCAACGACCGCTTCGTCATCGTCGTCCTGCTCGCCGCCCGCGTCGCGCCGCAGACGGTGTGGTTCCTGCAGAACTTCATCGACGCGGTGCCGATCGAGATCGAGGAATCCGCCGCCCTGGACGGGGCGAACCGCCTGCAGATCCTCACCCGCCTGGTCCTGCCGCTGATCAAGCCCGGCATCGCGGCGATCGCCGTCATCGGCATCGTCACCATCTGGAACGACTACATCACCGTGGCCGTGTTCGCGCCCGATATCGGCAAGCGCACCCTGCAGGTCGCGCTCGTCAACCAGGTCTTCGACGCCGTCGGCATCTCCTGGTCCTACATGATGGCCTTCGCGATAATGGCCTCCCTCCCCGTCATGATCCTGTTCGGCCTCGTCCAGAAATGGTTCGTCGCCGGCCTCACCGCCGGAGCCGTCAAGGGCTGA
PROTEIN sequence
Length: 282
MSSSMSARPLAGLAQRGLGLLVAAVVLGPIAWGLATSLKTEVMAVALPPTIIPSPLTFENYLGVLAYQGFLLELWNSTLYAVGAVLVALLVGIPAGYAASRFDFPAKKLVMMVILATSMVPGVAVLVPTYYVLDAFGLLNDRFVIVVLLAARVAPQTVWFLQNFIDAVPIEIEESAALDGANRLQILTRLVLPLIKPGIAAIAVIGIVTIWNDYITVAVFAPDIGKRTLQVALVNQVFDAVGISWSYMMAFAIMASLPVMILFGLVQKWFVAGLTAGAVKG*