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berkeley_reactor_200306_biofilm_scaffold_12255_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8555..9427)

Top 3 Functional Annotations

Value Algorithm Source
thiamine ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI00036F7E73 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 299.0
  • Bit_score: 404
  • Evalue 8.50e-110
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB97791.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 297.0
  • Bit_score: 396
  • Evalue 1.90e-107
Putative sugar ABC transporter (Permease protein); exported protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 297.0
  • Bit_score: 393
  • Evalue 4.20e-107

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGACTGAGCTCGCCCTCGCCCGCCCGCAGGCCGCCGCGCCGGCGCGCAGCCCCTTCCACCCCGGGCCGATCCTGCGCCTGGGCGTGCTCCTGATCGTCGCGGCGATCGTGCTGGTGCCGCTGCTGGCGACCGCCCTCGGCGGCTTCAAGGACCTCGGCGACCTCAGGGCCAACCCGTTCGGCTTGCCGGCGCGCTGGGTCTGGGCCAATTACTGGGACATCCTGGCGAGCGCACGCTATTGGCGCCTGCTCGGCAATTCGCTGATCATCGCCGGGCTCACCGTGGCGCTGACCTTGACTCTGGCCGCGCTCGCCGCCTTCGCCTTCGCGCATCTGCGCTTCTTCGGCGAGCGCTTCCTGCTCGCCTATCTCCTGATCGGCATGATGTTCCCGGCGGCGACCGCGATCCTGCCGATCTTCATCAAGGTGCGCAATCTCGGCCTGCTCGACACCGCCTGGGGCGTGGTGCTGCCGCAGGTCGCCTTCGGCCTCGGCATGGCGGTGCTGCTCTTGCGCAACGCCTTCCGGCAACTGCCCTCCGAGCTGCTCGACGCGGCCCTGGTCGACGGCTGCGGCTATGTCAGGTACTTCCTCCTGGTGACGCTGCCGCTCTCCCTGCCGATTCTGGCGACGGTGGCGATCGTCGCCTTCGTCGGCTCCTGGAACAATTATCTCCTGCCGCTGATCCTGCTCAACTCCGACGCCAATTTCCCCTGGCCGCTCGGGCTGATGGCCTATCAGGGCGAATATTCCACCGCCTGGCAGCTGGTGCTGGCCTTCATCACCCTGACCATCCTGCCGGCGATCCTGATGTTCCTGCTGGCGCAGAAATACATCGTCGCCGGGCTGACGGCGGGCGCGGTGAAGGGGTGA
PROTEIN sequence
Length: 291
MTELALARPQAAAPARSPFHPGPILRLGVLLIVAAIVLVPLLATALGGFKDLGDLRANPFGLPARWVWANYWDILASARYWRLLGNSLIIAGLTVALTLTLAALAAFAFAHLRFFGERFLLAYLLIGMMFPAATAILPIFIKVRNLGLLDTAWGVVLPQVAFGLGMAVLLLRNAFRQLPSELLDAALVDGCGYVRYFLLVTLPLSLPILATVAIVAFVGSWNNYLLPLILLNSDANFPWPLGLMAYQGEYSTAWQLVLAFITLTILPAILMFLLAQKYIVAGLTAGAVKG*