ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_66

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(65003..66217)

Top 3 Functional Annotations

Value Algorithm Source
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I2C1_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 406.0
  • Bit_score: 574
  • Evalue 6.60e-161
polyhydroxyalkanoate depolymerase similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 406.0
  • Bit_score: 574
  • Evalue 1.90e-161
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:ADP70205.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 406.0
  • Bit_score: 574
  • Evalue 9.20e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGATGTACCGGGCTTATCAGGCACAGGCGGACCTCCTGGAAACCGTCCGCGCCGTCGGCGGCCTGGCGCTGGGGGGGATCGACCCCTGGCGGAGCTGGGATCCCGAGCGGACCTTCGGCCATCTCGACGCCGCCAGCAGGCTCATGGCCCGCGCCGGGCTCACCCATGCGCGGCCCGACTATCGCATCGGCACCGTGCGGGTCGGCAACCGCGAGGCCGCCGTCACCGAGGTGCCGGTGCTCGCCACGCCTTTCGGCACGCTGCTGCATTTTGCCAAGGACGTCGATGTCGCCCAGCCGCGCGTGCTGGTGGTGGCGCCGCTGTCGGGCCATTTCGCCACGCTCCTGCGCAACACGGTGCAGACCCTGCTCGCCGACCATGACGTCTTCATCACCGACTGGCACAATGCCCGCGACGTGCCGCTCGCGGCGGGGCGCTTCGGCTTCGACGACCATGTCGAGCACCTCATCCGCTTCCTCGAGGCGATCGGCCCGGGCGGCCATGTGCTGGCGGTCTGCCAACCCTGCGTGCAGGTGCTGGCGGCGGTCGCCGTCATGGCTGAGGCCGGCAACCCGGCAGAGCCGCGCAGCATGACGCTGATGGCCGGCCCGGTCGACACCCGCGTCAACCCGACCAAGGTCAACGAGCTGGCGACGGGCAAGCCGATCGCCTGGTTCGAGGACAACCTGATCGCCACCGTGCCCGCGCGCCACGCCGGGGCGGGGCGACGGGTCTATCCCGGCTTCGTGCAGCTCGCCGCCTTCATGGCGATGAACCCGGAGCGGCACGTCAAGGCCCATCGCGACCTCTACAGGCACGTCGCCCGCGGCGAGGACGAGAAGGCCCGCGTCATCGAAGCCTTCTACGACGAATATTTCGCCGTCCTCGACCTTACCGCCGAGTTCTACCTGGAGACCGTGCGCATCGTCTTCCAGGACACGCTGCTGGCCCGCGGCGCCCTGACCTTCCGCGGCGGGCGGGTCGATCCCGGCGCCATCCGCCGCACGGCGCTGCTGACCGTCGAGGGCGAGCGTGACGACATCTGCGCCCTCGGCCAGACCGCGGCTGCCCACGAGCTGTGCACCGGCCTCAAGCCCTATCGCCGGCGCCACCACATGCAGCCCGGCGTCGGCCATTACGGCGTGTTCAGCGGCCGGCGCTGGGAAGGGCAGATCTACCCGATCGTGCGCAACGTCATGGTGTCGAGCGAGTGA
PROTEIN sequence
Length: 405
MMYRAYQAQADLLETVRAVGGLALGGIDPWRSWDPERTFGHLDAASRLMARAGLTHARPDYRIGTVRVGNREAAVTEVPVLATPFGTLLHFAKDVDVAQPRVLVVAPLSGHFATLLRNTVQTLLADHDVFITDWHNARDVPLAAGRFGFDDHVEHLIRFLEAIGPGGHVLAVCQPCVQVLAAVAVMAEAGNPAEPRSMTLMAGPVDTRVNPTKVNELATGKPIAWFEDNLIATVPARHAGAGRRVYPGFVQLAAFMAMNPERHVKAHRDLYRHVARGEDEKARVIEAFYDEYFAVLDLTAEFYLETVRIVFQDTLLARGALTFRGGRVDPGAIRRTALLTVEGERDDICALGQTAAAHELCTGLKPYRRRHHMQPGVGHYGVFSGRRWEGQIYPIVRNVMVSSE*