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berkeley_reactor_200306_biofilm_scaffold_12255_78

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(78355..80298)

Top 3 Functional Annotations

Value Algorithm Source
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMM5_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 664.0
  • Bit_score: 894
  • Evalue 4.60e-257
Fis family GAF modulated sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 664.0
  • Bit_score: 894
  • Evalue 1.30e-257
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS69268.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 664.0
  • Bit_score: 894
  • Evalue 6.50e-257

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
GTGAGGCAGGAGCAGGCGGCGCATATCGACGAGCTCGTGCGCGCGGCCGCCGGTCAGGCGAGCCGGCGCGATGCCGTCATCCGGCAGTCCTGGCTGCGCTGCGTCGGCGAGCACAAGCTCGACCCGGTGGCGCTGCGCGATCCCTGCATCGTCACGCACGGCCTGCTGCGCGAGCACCAGGATGCCATGGACGAGTTCCTCCACACCGCCCGCTACGGGGTGGAGACGCTGTACCGGCAGGTGGCGGGCCTGGGCTATGTCCTGCTGCTCACCGACGCCAAGGGCGTCACCGTCGACTTCATCGGCGACCCGACCTTCGACAACAACCTGATGCGCGCCGGCCTCTATCTCGGCGCCGACTGGAACGAGCGCCATGCCGGCACCTGCGCGGTCGGCACCTGCATCGCCACCGGCGAGCCCCTGATCGTGCACCAGACCGACCATTTCGACGCGACCCATATCCCGCTCACCTGCACGGCCGCGCCGGTGTTCGATCCCGGCGGCGCGCTCGCGGCGGTGCTCGACATCTCGGCCCTGCGCTCGCCCGAGCCCAAGGAGAGCCAGTTCCTGGCCCTGCAGCTGGTCAAGGCCTTCGCCCACAAGATCGAGATCGCCAACCTGCTGAACCGCTTCCGCAACCAGTGGATCCTGAAGCTCTCGGCCTCCTTCGAGTTCGCCGATATCGACCCCGACCTCGTGCTCGCCCTCGACGCCGCCGGCCGCATCATCGGCTTCAACAACCGGGCGCGGCTCCTCGTGGAGCACGAGCGGCCGGGCGGGGCGCCGCTGCTCGGCCGGCCGGTGGGCGAGCTCTTCGATTTCGGCGTCGACGACCAGCCGCGCTTCGTGCGCTCGCGCCCCACCGCGCAGCGCACCGTGCGCCTCCTTGCCGGCGGCGTCCTCTTCTTCGCCCAGAGCCTGCCGCCGCCCGCGCCAGCCCCGACGCCGGCCGCGGCCACGGCCCCGGTGCTGCCGAAGCCCCTGCAGGCCCTGTTCCGGGGCGATGCGCTGATGCGGGACGTCGTCACCCGCGCCGCCAAGCTGGTGGACACGCGCATGAGCCTCCTGATCCACGGCGAGACCGGCACCGGCAAGGAGCACCTGGCCAAGGCGCTGCACGCCGCCAGCGCCCGGGCCGGCCGGCCCTTCGTCGCCGTCAACTGCGCGGCGCTGCCGGAGACGCTGATCGAGGCCGAGCTGTTCGGCTACGAGGCCGGGTCCTTCACCGGCGCCAGCGGCAAGGGCCGCAAGGGCCTGATCATCGAGGCCGACGGCGGCACCCTGTTCCTCGACGAGATCGGCGACATGCCGCTCGCCTCGCAGACGCGGCTCCTGCGCGTGCTGGCCGAGCGGGAGGTGACGCCGGTCGGCCGCACCCGGCCCATCGCGGTCGACATCCGCGTCATCGCCGCCACCCATCGCGACCTGGTCGAGGCGGTCAAGGCCGGCCGCTTCCGCGAGGACCTCTATTTCCGCCTCAACGCCGCCGTGCTCAACCTGCCGGCCCTGCGTCGGCGCGCCGACCTCGATTGGCTGATCGGCGAGCTCCTGGCACGCGACGGCTGGGATGCCGAGCTCGGCGACAGCCTGTCGCCGGCGGCGCTGAACGCCCTGCGCGCCTATCCCTGGCCCGGCAATATCCGCGAGCTGATCAACGCGCTCGACTATGCCCGCGCCGTGGCGGGCCGGGGCATGATCGGGCTGGAGGACCTGCCGGACGCCGTTCGCCGCGCCGCCCATGGCGACGGCTGGCCGAGCTTCGCAGCGGCCGTCCCGACGACGGGCGACAGCGCGCCCGCCCATCCGGCCGAGGCGCTCGAAGCGGCGCTCCGCGCCCGCCACTGGAACGTCTCCGCCGCCGCCCGCGACCTCGGCATCGACCGCACCACGGTGCACCGCCGCATGCGCCGCCTCGGCATCGTGCCGCCGCACCGAAGGGATTGA
PROTEIN sequence
Length: 648
VRQEQAAHIDELVRAAAGQASRRDAVIRQSWLRCVGEHKLDPVALRDPCIVTHGLLREHQDAMDEFLHTARYGVETLYRQVAGLGYVLLLTDAKGVTVDFIGDPTFDNNLMRAGLYLGADWNERHAGTCAVGTCIATGEPLIVHQTDHFDATHIPLTCTAAPVFDPGGALAAVLDISALRSPEPKESQFLALQLVKAFAHKIEIANLLNRFRNQWILKLSASFEFADIDPDLVLALDAAGRIIGFNNRARLLVEHERPGGAPLLGRPVGELFDFGVDDQPRFVRSRPTAQRTVRLLAGGVLFFAQSLPPPAPAPTPAAATAPVLPKPLQALFRGDALMRDVVTRAAKLVDTRMSLLIHGETGTGKEHLAKALHAASARAGRPFVAVNCAALPETLIEAELFGYEAGSFTGASGKGRKGLIIEADGGTLFLDEIGDMPLASQTRLLRVLAEREVTPVGRTRPIAVDIRVIAATHRDLVEAVKAGRFREDLYFRLNAAVLNLPALRRRADLDWLIGELLARDGWDAELGDSLSPAALNALRAYPWPGNIRELINALDYARAVAGRGMIGLEDLPDAVRRAAHGDGWPSFAAAVPTTGDSAPAHPAEALEAALRARHWNVSAAARDLGIDRTTVHRRMRRLGIVPPHRRD*