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berkeley_reactor_200306_biofilm_scaffold_12255_130

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(134973..135695)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding protein LysM n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GZM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 248.0
  • Bit_score: 370
  • Evalue 6.60e-100
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:ESZ04290.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 248.0
  • Bit_score: 370
  • Evalue 9.20e-100

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Taxonomy

Mesorhizobium sp. L2C089B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCCCATGTGTCCTTTCGCCGTTTCCAAGCCGATCAGCGGCCCGTCGGGCTCCTACACCGGCGGCCCCTTCAAGATCGTCCACCACACCACCGAGGGCGGCACGGCCCAGGGCGCCTTCGACGCCTTCAAGGCGCATCGCTCGGACCCGCACTTCACCGTGGACGCGACCACCGTCTACCAGCACATCGACACCGGCATGGCGGCGCGGGCGCTGCGCAACGCGCCGGGCGGCGTGCAGACCAACCGGGATTCCGCCATCCAGATCGAGGTGGTCGGCTTCGCCCATCGCCCGAAGACCCGGGCGACGCTCGACAATGTCCGCCGGCTCTGCCGCTGGCTCGAGGCGACGCACGGCATTCCCAAGGTCTGGCCGAACGGCCGCCCCAAGCCGGCGGTCGACGGCCGCGATCCCGGCGGCCACAACCGCAACGCCGCGAACTGGGACGGCAAGGGCGGCCATTACGGCCATTGCCATGTGCCGGAGAACACCCATTGGGATCCGGCCTATACCAAGGACGAGGCCGACTTCATCATGCTCGACAACACCGAGGGCATCGCCGAGGGGCGCTTCTCCGCGCTGATCGAGGAGGATCCGGGCCTGGCGAGCGACCAGTCGCGCATGCCCGACCATTGCCACGGCGAGTCCTCGGCGCCGGCCGCAGCGGCGGCAAGGCCGCGGCGGAGCAGGACGCGCCGCAGCGCCGGCAAGGTTTCGGCCTGA
PROTEIN sequence
Length: 241
MPMCPFAVSKPISGPSGSYTGGPFKIVHHTTEGGTAQGAFDAFKAHRSDPHFTVDATTVYQHIDTGMAARALRNAPGGVQTNRDSAIQIEVVGFAHRPKTRATLDNVRRLCRWLEATHGIPKVWPNGRPKPAVDGRDPGGHNRNAANWDGKGGHYGHCHVPENTHWDPAYTKDEADFIMLDNTEGIAEGRFSALIEEDPGLASDQSRMPDHCHGESSAPAAAAARPRRSRTRRSAGKVSA*