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berkeley_reactor_200306_biofilm_scaffold_12255_142

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(147222..148244)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2LDY6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 335.0
  • Bit_score: 309
  • Evalue 3.30e-81
Transcriptional regulator {ECO:0000313|EMBL:EJJ31284.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 335.0
  • Bit_score: 309
  • Evalue 4.70e-81
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 334.0
  • Bit_score: 280
  • Evalue 3.60e-73

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGATCAGGCCAGGCACAAGCGCCCGACGATGACGGACATCGCCCGCATGGCGGAGGTCGACATCTCGACCGTCAGCCGGGCCTTGGCGAACTCCCCGCGCGTGACGGAAGAAACCAAGGAGCGGATCCGACGCATCGTGGAGGAGACGGGCTATGTCGTGAACCACGGCGCCCGCATGCTGCGAAGCCGGTCCTCCAACCAGATTCTCGTCTTGCTGGGCAACATCGCCGCGACGACGTTCCCGGAGGTCGTGCTCGGGATCGAGGAGGCCGTGCAAGAGCATGGTTACAGCGTGCTCGTCGGCAGCACGCACAACGACCCGGAGCGACAGGAGATCCTCGCCAACCAGCTTCTGACAGGCGCCGCGGACGGCATCATCCTGATGACCGGCCTGCTGCCCGAGGTCGTGCGCAATTTTCCGAACTACGAGCAGCATGTCGTCGCGGTCACGCGCATGGTGCCCGACAAGCGCATCCCGCAGGTCAATATCGACAACAGGGCGGCGATGGAGACTGCGGTCGCCCATCTGCTGGCGCTCGGGCACAGCCGCATCGTGCATCTGAGCGGACCGCTCGACAGCCCGACCTTCCAGGCCCGCGCGGAAGGGTACAGGCGGGCCATGCGGTCGGCCGGCGCCCATCCCGCCGTCATTCCTTCACAGGCCTTCAACATCCAGGCTGGCATCGAAGCGATGGAGCGGCTCCTGGCACTGCCCGACCGGCCGACCGCGATCATCTGCGCCAGCGACGAAATGGCCATGGGCGCGATCAGCCTCGCCACAGGAAAAGGCATCCGGGTGCCGGACGACATGTCGTTCGTTGGATTCGACGACATTCCCTTCAGCGTCGTCATGAACCCGCCGCTCTCCACCATCCACATTCCACGCCGCGACATGGGCCGTGCCGGCGGGCGCATCCTGCTCCGCAACCTGACCGAGGGCGCAGGCAAGGCGGAAAACGTGGTGCTGAGGCACGAGCTGATCGTTCGGGGAAGTTGCGGCAGGCTCTCCCGGAGCCGTTGA
PROTEIN sequence
Length: 341
MDQARHKRPTMTDIARMAEVDISTVSRALANSPRVTEETKERIRRIVEETGYVVNHGARMLRSRSSNQILVLLGNIAATTFPEVVLGIEEAVQEHGYSVLVGSTHNDPERQEILANQLLTGAADGIILMTGLLPEVVRNFPNYEQHVVAVTRMVPDKRIPQVNIDNRAAMETAVAHLLALGHSRIVHLSGPLDSPTFQARAEGYRRAMRSAGAHPAVIPSQAFNIQAGIEAMERLLALPDRPTAIICASDEMAMGAISLATGKGIRVPDDMSFVGFDDIPFSVVMNPPLSTIHIPRRDMGRAGGRILLRNLTEGAGKAENVVLRHELIVRGSCGRLSRSR*