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berkeley_reactor_200306_biofilm_scaffold_12255_145

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 150436..151770

Top 3 Functional Annotations

Value Algorithm Source
D-amino acid oxidase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035CF9E1 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 440.0
  • Bit_score: 658
  • Evalue 3.80e-186
D-amino acid oxidase {ECO:0000313|EMBL:EPE98384.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 440.0
  • Bit_score: 652
  • Evalue 2.20e-184
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 440.0
  • Bit_score: 651
  • Evalue 1.00e-184

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCCCGGTCCTAGGGTCGTCGCGGTTCAGGGCGACGAGGCCGCGCCCGCGAAGGTCGATGTCGTCGTGGTCGGCGGGGGCATCGTCGGGGCGTCGACCGCGCTGGAGCTGGCCGAACGCGGCATCAGCGTGGCGCTGTGCGAAAAGGGCGGCATCGGCAAGGAGCAGTCGAGCCGCAACTGGGGCTGGGTGCGGCTGTCGCGGCGCGACCCGCGCGAAGTTCCGCTGATGGTCGAGGCGATGCGCATCTGGGACGGCCTGGATCGCCGCATCGGCCGCGATACCGGTTTCACCCGCTGCGGCATCGTCTTCGCCTGCGCTTCGGACGCCCAGCTCCAGCAATACGACGACTGGCGGCGCAACCTGGAAGGCTACCAGATCGAGACGCGGATGCTCAGCTCCGCGGAGTATGCGGCGATGTTCCCGGGCCTTCGCGGCCGGGTTCGCGGCGCCCTCTATACGCCGACGGACGGCCGTGCCGAGCCGCAGAAGGCGGCGCCGGCGATAGCCGAGGCGGCCCGCGCCAAGGGCGCCGCGATCCTGACCGAATGCGCGGTGCGCGGCGTGGAGACGAGCGCCGGTCGCGTCAGCGCCGTCGTCACCGAGCTCGGCCGCATCGCCTGCAGCCAGGTCGTCGTGGCGGGCGGGGTGTGGAGCAACCTGTTCTGCGGCCGCCACGACATCGATGTTCCGCAGCTCAACGTCATGAACTCGGTGCTGCGGACGAAGCCGCTCGAAGACGGGCCGTCCCAGACGCTCTGGACGCGCGATTTCGCGGTGCGGAAGCGCCAGGATGGCGGATACACGATCGCATCGGGCCACGCCAACATCGTCGACATCGTCCCCAAGTCCTTCCGCTACGGCTGGAAATATCTGCCGGCCTTCCGCGAGGAATGGCGGTCGCTGCGCTTCCGGATTTCCCGACGCTTCTTCGTCGAAGCATCCATGCCGCGGCGCTGGGCCATGGACGAGGCCAGCCCGTTCGAACATGCGCGCGTCCTCGATCCGGTGCCCTCGCAGCGCCATACCAAGGGCGTCCTGAGACGTGTCGCCGAAGCATGGCCGGCCTTTGGGAGGGCGGAGATCGCGCAGACATGGGGCGGCTACATCGACATCACCCCTGACGCTGTCCCGGTCATTTCGGCGGTCGATGCGCTGCCGGGCTTCCATATCGCCACCGGCTTCTCCGGCCATGGTTTCGGGATCGCGCCCGCGGCCGGACGCCTGATGGCCGACATCCTGACCGGCCGCCCGCCGGTCGTCGATCCGACGCCCTTTCGGTTCTCGCGTTTTTCGGACGGCTCGAAGATCGAGCTGATGCCCGATATGCGGTGA
PROTEIN sequence
Length: 445
MPGPRVVAVQGDEAAPAKVDVVVVGGGIVGASTALELAERGISVALCEKGGIGKEQSSRNWGWVRLSRRDPREVPLMVEAMRIWDGLDRRIGRDTGFTRCGIVFACASDAQLQQYDDWRRNLEGYQIETRMLSSAEYAAMFPGLRGRVRGALYTPTDGRAEPQKAAPAIAEAARAKGAAILTECAVRGVETSAGRVSAVVTELGRIACSQVVVAGGVWSNLFCGRHDIDVPQLNVMNSVLRTKPLEDGPSQTLWTRDFAVRKRQDGGYTIASGHANIVDIVPKSFRYGWKYLPAFREEWRSLRFRISRRFFVEASMPRRWAMDEASPFEHARVLDPVPSQRHTKGVLRRVAEAWPAFGRAEIAQTWGGYIDITPDAVPVISAVDALPGFHIATGFSGHGFGIAPAAGRLMADILTGRPPVVDPTPFRFSRFSDGSKIELMPDMR*