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berkeley_reactor_200306_biofilm_scaffold_12255_148

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 154712..155587

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter, membrane spanning protein n=2 Tax=Agrobacterium RepID=F0L9X0_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 288.0
  • Bit_score: 427
  • Evalue 7.20e-117
peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 288.0
  • Bit_score: 427
  • Evalue 2.00e-117
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:AHK02854.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 288.0
  • Bit_score: 427
  • Evalue 1.00e-116

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCCATGTCGCTTCGCTGTCTCCCCGGACGGAGAGCCTGCTCGGCCGCCCACTGCGCCGCTTCGCTCGCAATCACCTCGCCGTGCTCGGCCTCGTCTCGATCGTGCTCATCCTGTTCCTGAGCATCGTCGGCCCGAGCCTGATCCGATACGACCAGCTCTTCATCGACCTGCGCGCCCGCTTCGCGCCGCCGCTCACGGGAAGCCATTGGCTCGGAACGGACCCGCTCGGGCGCGACATCGCGGCCCGTCTGCTCATGGCCGGACGCGTCTCCCTGCTGGTCGCCTTCTCGTCCATGCTGATGAGCGTGCTCATCGGCTCCAGCATCGGCATCGTCGCGGGCTATTACGGCGGCAGGATCGGCGCGGCGCTGATGCGCGTCGTCGACGCATTCCTGTGCTTTCCGTCGATCTTCCTTCTGCTGACGCTTGCGGCTTTCGTCCAGCCGAGCCCCATCATGATCACGGTGCTGATCGCGGCGACGAGCTGGATGGAAATCTCGCGCATCGTCTCCGCCGAGGTGAAATCGCTGAGGGAGCGCGAATTCGTGCTGGCCGCGCGCATGGCCGGCCTCTCGGGACGCTGGATCATGGTGCGCGAGCTCTTGCCCAACGTCATCGGCCCGATCATCGTCGCGGCGACGCTGACGGTGGCGCGGGCCATCCTTTCCGAAGCCTATATCAGCTTCCTCGGCTACGGCATCCAGCCCCCGGCCCCGAGCTGGGGCAACATGCTGAACGGCGCGCAGCAATATCTGTCCATGGCGCCGTGGCTCGCGATCATTCCCGGGCTGATGATCACGTGGGCGGTGACGAGCTTCAACTTCATCGGCGACGGGCTGCGCGACGCTCTCGACGCGCGGAGCGAACAATGA
PROTEIN sequence
Length: 292
MTHVASLSPRTESLLGRPLRRFARNHLAVLGLVSIVLILFLSIVGPSLIRYDQLFIDLRARFAPPLTGSHWLGTDPLGRDIAARLLMAGRVSLLVAFSSMLMSVLIGSSIGIVAGYYGGRIGAALMRVVDAFLCFPSIFLLLTLAAFVQPSPIMITVLIAATSWMEISRIVSAEVKSLREREFVLAARMAGLSGRWIMVRELLPNVIGPIIVAATLTVARAILSEAYISFLGYGIQPPAPSWGNMLNGAQQYLSMAPWLAIIPGLMITWAVTSFNFIGDGLRDALDARSEQ*