ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_5168_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2760..3188)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFB2C7 related cluster n=1 Tax=unknown RepID=UPI0003CFB2C7 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 137.0
  • Bit_score: 167
  • Evalue 8.50e-39
Hemoglobin-like protein HbN {ECO:0000313|EMBL:KFB75280.1}; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 140.0
  • Bit_score: 168
  • Evalue 5.40e-39
glbN; hemoglobin-like protein HBN similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 148.0
  • Bit_score: 150
  • Evalue 3.10e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter sp. SK-02 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGCGCAACACTGCTCATCGCCGGCCTGGTCGCCGGCGCCATATCGATGTCGACCGGCGCGGCCGAGGCCGGGAAGAGCCTCTACGAGCGGCTCGGCGGTCGGCCCGCCATCGTCGCCGTGGTCGACGATTTCGTCGCCAACGTCGCCGCCGACAAGCGCATCAACGGCTTCTTCGCCAAGACCGATGCCAAGAGCTTCAAGGCCAAGCTGGTCGACCAGCTCTGCGCCGGCACGGGCGGTCCCTGCGTCTACACCGGCAAGGACATGAAGACGGCGCACCAGGGCCGTGGCATCCACGAGGAGCATTTCGCGGCTCTGGTCGAGGATCTCGACAGGACTCTTGCCAAGTTCAAGGTGCCGGCGCGCGAGCAGAAGGAGCTCCTCGCCATCCTTGCGCCGATGAAGCCGGACATCGTCGAGAAATAG
PROTEIN sequence
Length: 143
MRATLLIAGLVAGAISMSTGAAEAGKSLYERLGGRPAIVAVVDDFVANVAADKRINGFFAKTDAKSFKAKLVDQLCAGTGGPCVYTGKDMKTAHQGRGIHEEHFAALVEDLDRTLAKFKVPAREQKELLAILAPMKPDIVEK*