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berkeley_reactor_200306_biofilm_scaffold_12839_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7623..7964

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFV1_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 166
  • Evalue 1.20e-38
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 166
  • Evalue 3.30e-39
Putative transcriptional regulator {ECO:0000313|EMBL:ADY67933.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 166
  • Evalue 1.60e-38

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Taxonomy

Agrobacterium sp. H13-3 → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGACCGGACGCCGCCCATTCGATGAGCTGCGCAAGGGAATGGCGCCGGAGCGCCGTACCCGCAATGCCGAAGCCACCAAGGCCATGCTCCACGAGATGGCGCTGCATGAGCTGCGCCAAGCCCGCGAGAAGTCGCAGGAGGAGCTTGCCCGCGACCTGCATGTCGGGCAGCCGGCCGTTGCCAGGCTGGAGCGTCGGGCCGACATGTATGTGAGCAACCTGCGCCGTTATATCGAGGCGCTGGGGGGCAAGCTGGAGATCACGGCGCGCTTCCCGGACGCGTCGGTATCGATCACCAACTTCAGCGAACTCGCCGAGCCCGAGGAGCAGCGGCCGGCATAA
PROTEIN sequence
Length: 114
MTGRRPFDELRKGMAPERRTRNAEATKAMLHEMALHELRQAREKSQEELARDLHVGQPAVARLERRADMYVSNLRRYIEALGGKLEITARFPDASVSITNFSELAEPEEQRPA*