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berkeley_reactor_200306_biofilm_scaffold_16012_35

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 36621..37022

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBT4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 128.0
  • Bit_score: 182
  • Evalue 1.80e-43
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX66257.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 128.0
  • Bit_score: 182
  • Evalue 2.60e-43
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 128.0
  • Bit_score: 169
  • Evalue 4.60e-40

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCCCAGCGAAACTCGCTTCGTTCCCGCCCTCGGCCGCGTGCTGATCGCGGTGATCTTCCTGCTCAGCGGCTTCGGCAAGCTCACCGCGCCGGGCGCGACGATGGGCTACATCGCCTCGGCCGGCCTGCCGCTCCCGGTCGTCGGCCTGATCATCGCCATCGTCGTCGAGCTCGGCGGCGGCATCCTGCTCGTCCTCGGCTACCAGACGCGCCTGGTCGCGCTGATCCTTGCGCTGTTCTCCGTCGCCGCGGCGCTGAGCTTCCACAACAATTTCGCCGACCAGGGCCAGATGATCAATTTCCTCAAGAACCTGGCCATGGCCGGCGGCCTGCTGCAGATCGTCGCCTTCGGTGCCGGCAGCCTCAGCCTGGATGCCCGCCGCGGCGGCGCCGGGGCGTAG
PROTEIN sequence
Length: 134
MPSETRFVPALGRVLIAVIFLLSGFGKLTAPGATMGYIASAGLPLPVVGLIIAIVVELGGGILLVLGYQTRLVALILALFSVAAALSFHNNFADQGQMINFLKNLAMAGGLLQIVAFGAGSLSLDARRGGAGA*