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berkeley_reactor_200306_biofilm_scaffold_22810_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3745..4329

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983U1_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 1.70e-37
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 4.80e-38
Transcription regulator {ECO:0000313|EMBL:BAB53789.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 2.40e-37

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCGTCGCCGGATCGTCGATGCCGCCTTCGAGGCGTTCGCGCGCGAGGGATATAACGCAACGCCGATGCACGCGGTCCGGGACCTCGCCGGCGTTTCCTCCGGCGCCTTCGCCCACCATTTCCCGACCAAGCACGGGCTGGGAATGGCGGTCATCCGCGAGCGGGTGGCGGAGGCGATCGGCAGGACCTGGATCGAGCCGCTCGTGCGGGCGGCCGACGCCAGATCGGGCATCCGCTCGGTCTTCGACACGACGATCGCGGAGATCGACGACAGCGGATCGGTCTCGGGGTGTCCCCTGGGGAACCTGGCGGCGGAGCTTTCCACGCAGGGGGAAGGATTTCGCGCCGAGATACACCGGATCTTTCGGCAATGGGGCGATGCGATCGCCGACAAGCTGGCGGCCGACGGCTGCCCGGAAGAGGATCGTGCCGGCATGGCGAGCTTCGTCGTCTCGTCGTTTTCCGGGGCGATGCTGCAGGCCAAGGCCTGCCAGTCGTCGGACCCGTTGCGATCGAGCGCAGCTCAGGTCGAGCGGATCATGAGAGGACCGGAAGCCGAACGGAACCGATCGGCACGTCAATAG
PROTEIN sequence
Length: 195
MRRRIVDAAFEAFAREGYNATPMHAVRDLAGVSSGAFAHHFPTKHGLGMAVIRERVAEAIGRTWIEPLVRAADARSGIRSVFDTTIAEIDDSGSVSGCPLGNLAAELSTQGEGFRAEIHRIFRQWGDAIADKLAADGCPEEDRAGMASFVVSSFSGAMLQAKACQSSDPLRSSAAQVERIMRGPEAERNRSARQ*