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berkeley_reactor_200306_biofilm_scaffold_22810_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10642..12138)

Top 3 Functional Annotations

Value Algorithm Source
ribose ABC transporter ATP-binding protein (EC:3.6.3.17) similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 499.0
  • Bit_score: 671
  • Evalue 1.40e-190
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL06_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 499.0
  • Bit_score: 671
  • Evalue 4.90e-190
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAJ97074.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 497.0
  • Bit_score: 684
  • Evalue 1.00e-193

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGACCGGCATGCCTCCCGTGGTCGAGCTGCGCAGCGTCAGCAAGCTCTATGGCGGCACGCCGGCCGTGGAGAACGTCGACTTCATCCTGCGGCGCGGCGAGATCCACGCCCTGCTCGGCGAGAACGGCGCCGGCAAGTCGACCCTGACCAAGATGATCGCCGGCGTCGTCACCCCGACGCGCGGCGAGATGTTCGTCGACGGCCAGCGGGCGGCCTTCGCCTCTCCCGCGGAGGCCATGCGGGCCGGGATGGTCATGGTGTTCCAGGAGAACAGCCTGGTGCCGTCCATGACGGTGGCGCAGAACATCTTCCTCGGCGACGAGCGCTTCTTCAACCGCCTGCGCCCCCTCTACATCGCCGCGCAGCAATTCCTGCAGGCGCTCAACTTCAACGTCGATCCCTGGGCCAATGTCGCCACGCTCGGCGTCGCCAAGAAGCAGATGGTGGAGATCGCCCGCGCCGTCCGCCAGCAGGCCCGCGTCCTGATCTTCGACGAGCCGACCGCTTCGCTGACGCCGGAGGAGAAGCATCATTTCTTCGCCCTCGTCCGCCGCCTCAAGGCGCAAGGCGTGTCGATCGTCTTCATCAGCCACGCGCTGGAGGAGGCGCTGGAGCTCGCCGACCACATCACCATCCTGCGCGACGGCCGGCTGGTGGCGAGCGACCGGCGCGAAGCCTTCGACCGCGACGGCATCGTCAGGGCGCTGGTCGGGCGAGCCCTGGCGCAGGACCTCTACGGCGAGGGCGGGCGCCGGGCCCGGCCGGCGGGCCGGCAGGTGCTCAGCGTGCAGAACCTGTCGATGGGCAAGGTGGTGCGCAACACCTCCTTCACAGCCTATGCCGGGCAGATCACCGGCATGTTCGGCCTGATCGGCTCCGGCCGCACCGAAACCGCCCGGATCATCGCCGGCATCGCCAAGCGCAACCTGTTCCACGGCGGCGAGATCCGGCTCGGCGAGCGCTCGGTGCGCTACCGCGTGCCGCGCCAGGCCGTGCGCGACGGCATCGTCTATGTCACCGAGGACCGCAAGCTCGAAGGCTTCTTCGACACGATGTCGATCGCCTGGAATATCGGCCTCGGGCACCTCGCCGCCCACGGCGGCGCCGTGGTGCGGCCCGCCGAGATCGCCGCCCTGGCGAAAACCTGGAGCGAGGCGCTCGCCGTGCGCTCGATCGGCGCGGACGCGAAGGTGATCGAGCTGTCGGGCGGCAACCAGCAGAAGGTGGTCATCGCCAAGTCGCTGGTGCAGCGCCCATCGCTGGTGATCTTCGACGAGCCGACGCGCGGCGTCGACGTCGGCGCCATCGCCGAGATCCATCGCATCATCAACGGCCTCGCCGACGACGGCCTCGCCGTCATCGTCATCTCCTCCTACCTGCCGGAGATCCTCAGCCTCTCCGACCGCATCCTCGTCTGCCGCAAGGGTCGGGTGGTGGAGGAGTTCAGTGCCGGCACCGCCACCGAAGAAGCCATCATGTACGCCGCGGTCCATTGA
PROTEIN sequence
Length: 499
MTGMPPVVELRSVSKLYGGTPAVENVDFILRRGEIHALLGENGAGKSTLTKMIAGVVTPTRGEMFVDGQRAAFASPAEAMRAGMVMVFQENSLVPSMTVAQNIFLGDERFFNRLRPLYIAAQQFLQALNFNVDPWANVATLGVAKKQMVEIARAVRQQARVLIFDEPTASLTPEEKHHFFALVRRLKAQGVSIVFISHALEEALELADHITILRDGRLVASDRREAFDRDGIVRALVGRALAQDLYGEGGRRARPAGRQVLSVQNLSMGKVVRNTSFTAYAGQITGMFGLIGSGRTETARIIAGIAKRNLFHGGEIRLGERSVRYRVPRQAVRDGIVYVTEDRKLEGFFDTMSIAWNIGLGHLAAHGGAVVRPAEIAALAKTWSEALAVRSIGADAKVIELSGGNQQKVVIAKSLVQRPSLVIFDEPTRGVDVGAIAEIHRIINGLADDGLAVIVISSYLPEILSLSDRILVCRKGRVVEEFSAGTATEEAIMYAAVH*