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berkeley_reactor_200306_biofilm_scaffold_22810_80

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 84005..84304

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQM4_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 97.0
  • Bit_score: 127
  • Evalue 4.00e-27
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 97.0
  • Bit_score: 127
  • Evalue 1.10e-27
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACL60536.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 97.0
  • Bit_score: 127
  • Evalue 5.60e-27

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCGCGAGGCCATCGAAGATCACGAAGATACTGAGGCCGTGCGGGAATTTGAGCGAAAGCTTGCCGCCGGAGAGGAGGAGCTTATCCCGGCCGAGGTGGTCGACCGCCTTCTCGATGGCGAGAACAAGGTCCGCGTATGGCGCCAGCATCGCGGCCACACCGCGAGCGATCTTGCCGAGTTGGCGGGTATCAGCGCGGCCTGTCTCTCTCAGATCGAGAGCGGCACCCGGGAGGGGAGTGTTGGCACGCTCAAGAAGATCGCGGCGGCGCTTGGCATCACGGTCGACGACCTCGCCTAG
PROTEIN sequence
Length: 100
MREAIEDHEDTEAVREFERKLAAGEEELIPAEVVDRLLDGENKVRVWRQHRGHTASDLAELAGISAACLSQIESGTREGSVGTLKKIAAALGITVDDLA*