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berkeley_reactor_200306_biofilm_scaffold_22810_121

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(127408..128538)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IV91_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 376.0
  • Bit_score: 622
  • Evalue 2.60e-175
pyridoxal-dependent decarboxylase, pyridoxal binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 376.0
  • Bit_score: 622
  • Evalue 7.30e-176
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein {ECO:0000313|EMBL:ADZ71422.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 376.0
  • Bit_score: 622
  • Evalue 3.60e-175

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACCGACCGTATCCTCGACTATCTCCGCCGCAACCCCTCCGACGCGCCCCGTCTCGTGGTCGACCTCGACGTGGTCGAGCGCAACTACCACGCCTTTGCCCATGCCCTGCCCGACACCCGCGTCTTCTACGCGGTGAAGGCCAACCCGGCGCCGGAGATTCTCGGCCTGCTCGCCCGTCTCGGCTCGAACTTCGACTGCGCTTCGGTGGTCGAGATCGAGCAGGCGCTGGCGGCCGGCGCCACGGCGGACCGCATCTCCTTCGGCAACACCATCAAGAAGGAGCGCGACATCGCCCGTGCCTACGAGCTCGGCGTGCGCCTCTTCGCGGTGGATTGCGAAGCCGAGGTGGAGAAGGTCGCCCGCGCCGCGCCGGGCAGCCGGGTGTTCTGCCGCATCCTCTGCGACGGCGCCGGCGCCGAATGGCCGCTGTCGAAGAAGTTCGGCTGCGTGCCCGCCATGGCCTCGATCGTGCTCGAGCACGCGCACGACCTCGGGCTGGTTGCCTACGGCATCTCGTTCCATGTCGGCTCGCAGCAGGGCAATGTCGAGGCCTGGGACAACGCCCTCGCCACGGCGGCCGGCCTGTTCCGCGAGCTCGCCGAGCGCGGCATCAACCTCGCCATGGTCAACATGGGCGGCGGCTTCCCGGCCAAGTACCTGCGCGCCATGCCCGGCGTGCCGGCCTATGGCGAGGCGATCTTCCGCTCGCTGTCGCGCCATTTCGGCAACCGGATGCCCGAGACCATCATCGAGCCCGGTCGCGGCATGGTCGGCGAGGCCGGCATGATCGAGGCGGAGGTGGTGCTGGTGTCGAAGAAGTCGGCGGACGACGAGGTCCGCTGGGTCTATCTCGACATCGGCAAGTTCCATGGCCTCGCCGAGACCATGGACGAGGCGATCCGCTACCCCATCCGCACCCTGCGCGACGGGGAAGCGACGGCGCCCTGCGTCATCGCCGGCCCGACCTGCGATTCCGTGGACGTCCTCTACGAGAAGACGCCCTATGAGCTGCCGGTGAGCCTGGCGATCGGCGACAAGGTGCTGATCGAAGCCTGCGGGGCCTACACGACGACCTATTCGTCGGTCGGCTTCAACGGCTTCCCGCCGCTGGCCTCCGTGGTGATCTGA
PROTEIN sequence
Length: 377
MTDRILDYLRRNPSDAPRLVVDLDVVERNYHAFAHALPDTRVFYAVKANPAPEILGLLARLGSNFDCASVVEIEQALAAGATADRISFGNTIKKERDIARAYELGVRLFAVDCEAEVEKVARAAPGSRVFCRILCDGAGAEWPLSKKFGCVPAMASIVLEHAHDLGLVAYGISFHVGSQQGNVEAWDNALATAAGLFRELAERGINLAMVNMGGGFPAKYLRAMPGVPAYGEAIFRSLSRHFGNRMPETIIEPGRGMVGEAGMIEAEVVLVSKKSADDEVRWVYLDIGKFHGLAETMDEAIRYPIRTLRDGEATAPCVIAGPTCDSVDVLYEKTPYELPVSLAIGDKVLIEACGAYTTTYSSVGFNGFPPLASVVI*