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berkeley_reactor_200306_biofilm_scaffold_22810_139

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 143277..146372

Top 3 Functional Annotations

Value Algorithm Source
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMJ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 1030.0
  • Bit_score: 1426
  • Evalue 0.0
Integrase {ECO:0000313|EMBL:KFG66696.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 1032.0
  • Bit_score: 1433
  • Evalue 0.0
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 1027.0
  • Bit_score: 1396
  • Evalue 0.0

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3096
ATGACCGCCGCCAGATCCGACCTGCCCATGTTCGCCGCTCCCTATGCTGCCGACGACGGCGTCATCGTCGGCCGGCTCCTCAACCAGCCGCGGCTCGACCAGGCGGCGGAGGCGCGGATCGACGCCCGCGCCACTCGCCTGATCCAGGCGATCCGCGACAGCGCCGGCTCGATCGGCGGCATCGAGGACTTCCTGCGCGAATATTCGCTCTCGACCAAGGAGGGCCTCGCCCTGATGATCCTGGCCGAGGCGCTGCTGCGCGTGCCCGACAAGGTCACCGCCGATGCGCTGATCGAGGACAAGCTGGGGCAAGGCGACTGGGCCCACCGCGAGACCAAGTCGGACGCCTTCCTGGTCTCGGCCTCGGCCTGGGCGCTCGGCGTCACCGCGCGCATCATCCAGCCCGGCGAGACGCCGGAGGGCATCGTCGCCTCGCTCGCCAAGCGCATCGGCGTGCCGACCGTGCGCACGGCGACGCGCCAGGCCATGAAGGTGCTCGGCTCGCATTTCGTGCTCGGCCAGACCATCGGCGAGGCGCTGAAGCGCGCCGCCTCGGGCGAGGCCCGCGGCTTTCGCTATTCCTTCGACATGCTGGGCGAGGGCGCCCGCACCGCCGAGGACGCGAGGCGCTACTTCAAGAGCTATGCAGACGCCATCGATGCCATCGGGCGCAATGCCGGCAACGAGGCGCTGCCGGCGCGGCCGGGCATCTCGGTCAAGCTCTCGGCGCTGCATCCGCGCTACGAGGCGGTGAGCCATGAACGGGTGATGGCCGAGCTGGTGCCCGAGGTGGTCGAGCTCGCCCGCCAGGCCAAGGGCTACGACCTCAACTTCACCATCGACGCCGAGGAGGCGGACCGGCTGGAGCTCTCCCTCGACGTCATCGCCGCGGTGCTGGCCGATCCGGGGCTGGCGGGCTGGAGCGGCTTTGGCCTGGCCATCCAGGCCTATCAGAAGCGCGCCTTCGCCGTCATCGAGCATGTCGAGGCGCTGGCCGCGAGCCTCGGCCGGCGGCTGATGGTGCGCCTGGTCAAGGGCGCCTATTGGGACACGGAGGTGAAGCGGGCGCAGGAGCGCGGCCTCGACGACTATCCGGTGTTCACGCGCAAGCCGGTGACCGACCTCAACTATGTCGCCTGCGCCCGCCGGCTGCTGGCGGCGCGCCCGCATCTCTATCCCCAGTTCGCCACCCACAATGCGCTGACCATCGCCAGCATCATCGAGGCGGCCGGCGGGGTCGAGGGCTACGAGTTCCAGCGCCTGCACGGCATGGGCGAGCAGGCCTACAAGGCGCTGATGCGCGAATTGCCGGCGGCCGCCTGCCGGGTCTATGCGCCGGTCGGCGGCCATGCCGACCTCCTGGCCTATCTCGTGCGCCGGCTCCTGGAGAACGGCGCCAATTCCAACTTCGTCTCGGTGTCGGCCGACCCGGCCGTGCCGGTCACCGAGCTGCTGAAGCGCCCGGCCGCCCTGGTCGGCTCGCCGGCGCGGGCGCGGCATGCCCGCATCCCGCTGCCCAAGGCGCTCTACGGCGCCGAGCGCCCCAACTCCGCCGGCGTCGAGCTCGGCTCGCGCGAGGCCCTCGCCGGCCTCGAGGCCGAGATCGCCGCCGGCCGCAAGCTGGCCGAGGCGGCCTCGATCATCGGCGGCAAGGCCGGCGGCGGCACGCCGCGGCCGGTGCTCTCGCCGATCGACGGCAGCCCGGTCGGCACGGTGACCGAGGCCGGCGCCGAGGCGGCGAGCGCGGCGATGGCGGCCGCGGCCGCCGGCTTCCACGCCTGGGACCGCACCGACGTCACCGTTCGCGCCGCGGCGCTGGACAAGGCGGCGGGCCTCATGGAGGCGCGGCGCGGCATGCTGCTGGCGCTGCTGCAGGACGAGGGCGGCAAGACGCTCGACGATGCGCTGGCCGAGCTGCGCGAAGCCGTCGACTTCTGCCGCTACTATGCCGCGCAGGCGCGCAAGATTTTCGGGCCCGGCGAGCACATGCCGGGGCCGACCGGCGAGGACAATATCCTGCGCCATCGCGGCCGCGGCGTGTTCGTGTGCATCAGCCCCTGGAACTTCCCGCTGGCGATCTTCCTCGGCCAGGTGGCGGCGGCGCTGGCGGCCGGCAATGCGGTGGTGGCCAAGCCCGCCGAGCAGACGCCGCTGATCGCCCATGCCGCGGTGAAGATCCTGCACGAGGCCGGCGTGCCCACGTCCGCCCTGCACCTCGTGCTCGGCGACGGGCGCACCGGTGCGGCGCTGACCGGCCATGCCGCCGTGGCCGGCGTCGCCTTCACCGGCTCGACCGAGACGGCCTGGGCGATCAACCGTTCGCTGGCGGCCAAGAACGCGGCCATCGTGCCGCTGATCGCCGAGACCGGCGGCATCAACGCGATGGTCGTCGACGCCACCGCCTTGCCCGAGCAGGTCGCCGACGACGTGGTGACCTCGGCCTTCCGCTCCGCCGGCCAGCGCTGCTCGGCCCTGCGGCTGCTCTGCGTGCAGGAGGACGTCGCCGACAAGGTCGTCGCCATGATCAAGGGCGCGGCGGAGGAGCTGAAGCTCGGCGACCCCCGACAGCCCGCCACCCATGTCGGCCCGGTGATCGACGCCGAGGCCAAGGCGGGACTGGAGGCGCATATCGCTGTCATGAAGGGCGCGGCCCGGACGCATCTCGCCATGGCGGCCCCGGCGCAGGGCACCTTCGTCGGCCCGCACATCTTCGAGATCGCCCGGGTCGAGGACCTGACGCGCGAGGTCTTCGGCCCGGTGCTGCACGTGGTGCGCTGGAAGGCCGGCCGGCTCGCGCCGCTGCTCGATGCCGTCGCCGCCACCGGCTACGGCCTGACGCTCGGCGTCCACACCCGCATCGAGGCGACGCTCGCCGCCGTCGCCGAACGCATGGCGGTCGGCAATATCTACGTCAACCGCAACATGATCGGCGCCGTGGTCGGCACCCAGCCCTTCGGCGGCGTCGGCCTCTCCGGCACCGGGCCCAAGGCGGGCGGCCCGAACTATCTGAAGCGCTTCGCCGCCGAGCAGGTGATCGCCGTCAACACCGCCGCGGCCGGCGGCAATGCCAGCCTGATCGCCATGGGCGAGGAATAG
PROTEIN sequence
Length: 1032
MTAARSDLPMFAAPYAADDGVIVGRLLNQPRLDQAAEARIDARATRLIQAIRDSAGSIGGIEDFLREYSLSTKEGLALMILAEALLRVPDKVTADALIEDKLGQGDWAHRETKSDAFLVSASAWALGVTARIIQPGETPEGIVASLAKRIGVPTVRTATRQAMKVLGSHFVLGQTIGEALKRAASGEARGFRYSFDMLGEGARTAEDARRYFKSYADAIDAIGRNAGNEALPARPGISVKLSALHPRYEAVSHERVMAELVPEVVELARQAKGYDLNFTIDAEEADRLELSLDVIAAVLADPGLAGWSGFGLAIQAYQKRAFAVIEHVEALAASLGRRLMVRLVKGAYWDTEVKRAQERGLDDYPVFTRKPVTDLNYVACARRLLAARPHLYPQFATHNALTIASIIEAAGGVEGYEFQRLHGMGEQAYKALMRELPAAACRVYAPVGGHADLLAYLVRRLLENGANSNFVSVSADPAVPVTELLKRPAALVGSPARARHARIPLPKALYGAERPNSAGVELGSREALAGLEAEIAAGRKLAEAASIIGGKAGGGTPRPVLSPIDGSPVGTVTEAGAEAASAAMAAAAAGFHAWDRTDVTVRAAALDKAAGLMEARRGMLLALLQDEGGKTLDDALAELREAVDFCRYYAAQARKIFGPGEHMPGPTGEDNILRHRGRGVFVCISPWNFPLAIFLGQVAAALAAGNAVVAKPAEQTPLIAHAAVKILHEAGVPTSALHLVLGDGRTGAALTGHAAVAGVAFTGSTETAWAINRSLAAKNAAIVPLIAETGGINAMVVDATALPEQVADDVVTSAFRSAGQRCSALRLLCVQEDVADKVVAMIKGAAEELKLGDPRQPATHVGPVIDAEAKAGLEAHIAVMKGAARTHLAMAAPAQGTFVGPHIFEIARVEDLTREVFGPVLHVVRWKAGRLAPLLDAVAATGYGLTLGVHTRIEATLAAVAERMAVGNIYVNRNMIGAVVGTQPFGGVGLSGTGPKAGGPNYLKRFAAEQVIAVNTAAAGGNASLIAMGEE*