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berkeley_reactor_200306_biofilm_scaffold_20018_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12608..12904)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G7A4_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 9.10e-40
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHK74819.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 1.30e-39
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 168
  • Evalue 7.50e-40

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
TTGAGCAAGGTTGCCGACAGCATCGGGCGCGCCCTTAAGGAAGCGGTGGCCTACGCCGAGGGCAAGGCGGACGAGAGCGCCTATCGCATCCATGTGCCGGAGAGGATCGACGTGAAGGCGATCCGGACACGCCTGTCTATGACGCAGGAAGAATTCGCAGGCCGGTTCGGGTTCAGCGTCAATACGCTACGCCATTGGGAACAAGGGTCGCGTCAACCCGAAGGGCCGACGAGAGCCTATCTCCTGGTGATCGAGCGGGCGCCCAAGGCGGTCCAGAAGGCTTTGCAGGCCATATGA
PROTEIN sequence
Length: 99
LSKVADSIGRALKEAVAYAEGKADESAYRIHVPERIDVKAIRTRLSMTQEEFAGRFGFSVNTLRHWEQGSRQPEGPTRAYLLVIERAPKAVQKALQAI*