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berkeley_reactor_200306_biofilm_scaffold_20018_132

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(122684..124177)

Top 3 Functional Annotations

Value Algorithm Source
Glutamyl-tRNA amidotransferase subunit A n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K0P1_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 473.0
  • Bit_score: 672
  • Evalue 2.90e-190
gatA; glutamyl-tRNA amidotransferase subunit A similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 473.0
  • Bit_score: 672
  • Evalue 8.10e-191
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ACM38439.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 473.0
  • Bit_score: 672
  • Evalue 4.00e-190

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGCCCGATCGCGAGGCATGCCGCATTCTCGGGCGGTGGAACGAGGGCCGCGACGTGCAGATCGGTGAATACGCCTCCCATGACGCCCTGGGCCTGGCCGCGCTGGTGGCGCGGCGCGAGGTCCATCCGGCAGAACTGCTGGATGCCGCCCTGGCGGCGGTCGACCTGGTGGACGGCTCGCTCAACGCCGTGGTCGCCACCTTCGCCGAGGAGGCGCGCCGCCACATTGCCGAGGGCCTGCCGGAGGGCCCGTTCCGCGGCGTGCCTTTCCTCCTCAAGGACCTGACGGCCCATTATGCCGGCCAGCCGACGGGCTCGGGGTGGCCGCCGCGCCTGACCTACGCGGCGCGGCGCGACACCACGCTGGTGGCGCGCTACAAGGCCGCCGGCCTGTCGATCTTCGGCAAGACGGCCGTGCCGGAGCTGGCGATGAACTGGAGCACGGAATCCTCCGCTCATGGCGCGACGCGCAACCCCTGGGACCTCGCCCGCACCGCCGGCACGTCGAGCGGCGGCTCGGCCGCGGCGGTGGCGGCCGGCATCGTGCCGATGGCGCACGGCAATGACGGCGGCGGCTCGATCCGCGTGCCCGCCTCCTGCTGCGGCGTCTTCGGCCTGAAGCCCTCGCGCGGGCGCAACCCGGTCGGCCCGGCCGGGGACCTCTGGCAGGGCATGCTGGTGGAGCACGCCCTGACCCGCTCGGTGCGCGACAGCGCCGCCCTGCTCGACGCCACTGCCGGGCCCGAGCCGGGCCAGTTCTTCAACAGCCCGGCCGGCGGCCCGTTCCTGCCCGAGGTCGGGCGCGATCCCGGCCGGCTGCGCGTCGCGGTGTCGACGAAGGCCCCCTACGGCGCGCCGACCCATCCCGACTGCATCGCCGCCGTGGCCGAGACGGTGATGCTGCTGGAGAGCCTCGGCCATGCCTGCGAACCGGCCGAGATCGACCTGCCGGAGACCGGCTGGTACGATTTCGAGACCTTCATCCTGGCCGAATATGCGGCGGAGATGCGGGCCGAGGCCGGCCTGCTCGGCCGTCCGGTGCGCGAAGAGGACTTTCCGCCGACGCTCTGGCACATGATCCAGGCCGGGGAGCGCATCAGCGCGGTGGAGCTCAACCTCGCCCTATCCGGCGTGCACCGGGTGGCGCAGGCGGTGGCCTCGCTGTTCGGGCGCTACGACGTGATCCTGTCGCCGACCCTGGCGCAGCCGCCGGTGCCGCTCGGCAGCTTCAGCCTCGCCGCTTCCCCGGCCGAGCACTTCGCCGCCTATCTCGCCTGGATGCCGTTCACCCACGTCTTCAACGTCAGCGGCTCGCCGGCCATGTCGGTGCCGCTGGTCTGGAATGAGGCCGGCCTGCCGATCGGCGTGCAGTTCGCCGCCGCCCCCCAGGCCGAGGCGACGCTGCTGCGCCTGGCGGGCCAGCTCGAGCAGGCGCGGCCCTGGGCCGGCAAGCGGCCGCCGGTCTCGGTGGCGAAGGCGGGAGGGGCGGCGTGA
PROTEIN sequence
Length: 498
MPDREACRILGRWNEGRDVQIGEYASHDALGLAALVARREVHPAELLDAALAAVDLVDGSLNAVVATFAEEARRHIAEGLPEGPFRGVPFLLKDLTAHYAGQPTGSGWPPRLTYAARRDTTLVARYKAAGLSIFGKTAVPELAMNWSTESSAHGATRNPWDLARTAGTSSGGSAAAVAAGIVPMAHGNDGGGSIRVPASCCGVFGLKPSRGRNPVGPAGDLWQGMLVEHALTRSVRDSAALLDATAGPEPGQFFNSPAGGPFLPEVGRDPGRLRVAVSTKAPYGAPTHPDCIAAVAETVMLLESLGHACEPAEIDLPETGWYDFETFILAEYAAEMRAEAGLLGRPVREEDFPPTLWHMIQAGERISAVELNLALSGVHRVAQAVASLFGRYDVILSPTLAQPPVPLGSFSLAASPAEHFAAYLAWMPFTHVFNVSGSPAMSVPLVWNEAGLPIGVQFAAAPQAEATLLRLAGQLEQARPWAGKRPPVSVAKAGGAA*