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berkeley_reactor_200306_biofilm_scaffold_20018_146

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(141424..142257)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IUP1_RAHAC similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 267.0
  • Bit_score: 347
  • Evalue 6.90e-93
Membrane component of an ABC superfamily sugar transporter {ECO:0000313|EMBL:KFC83296.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 272.0
  • Bit_score: 348
  • Evalue 5.70e-93
dipeptide/oligopeptide/nickel ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 267.0
  • Bit_score: 347
  • Evalue 1.90e-93

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Taxonomy

Ewingella americana → Ewingella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGACCATCTTCGGACACAAAGCCCCGCTCACGGCGCAGATCGGCCTCCTGATCATCGCCCTCAATATCGTCGTGGCGCTGTTCGGTCCCTGGTTCGCGCCCTATGCGCAATCGGAGTCCATCGGCGGAAACTGGGACCCCCCGTCTCCCGAGATGTGGCTCGGGGCCGACCAGATCGGCCGAGACCTGCTCACCCGCCTGATCTACGGCGCGCGCATGACCATCGGCATCGCCCTGGCGACGACCTTGCTCTCCTTCACCATCGGCATCACGTTCGGCCTTGCCGCGGCGGTGATGGGCAAATGGGTCGACACGCTGCTCTCGCGCATGGTCGACGTCATCCTGTCGATTCCGCTCCTCATCTTCGGCATGATCATCATCGGCGTGTTCGGCTCGTCGATCCCGACGCTGATCATCACCATCGCAGTGCTCGACTCCACCCGCGTATTCCGCCTCGCCCGAGCGCTCGGCATGAACCTGGTCGTGCTCGAATTCGTCGAGGTGGCGCGGCTGCGCGGCGAGGGCCTGTGGTGGGTGATCAGCCGCGAGATCCTGCCCAATGCGGCCGCGCCGCTGATCTCCGAGTTCGGCCTGCGCTTCTGCTTCAACTTCCTGTTCGTCGCGGCCCTGAGCTTCCTGGGCCTGGGCGTGCAGCCGCCCTATGCCGACTGGGGCGGCATGGTGCACGACAATGCGGGCGCCATCACCTTCGGCATGTACGCGCCGCTCTATCCGGCAGCGGCGATCGCGCTGCTCACCGTCGGCATCAATCTGGTCGTCGACTGGCTCCTGTCGATCGACGCCCGCCCTTCGGGCGCGCAAGCGGAGATGTGA
PROTEIN sequence
Length: 278
MTIFGHKAPLTAQIGLLIIALNIVVALFGPWFAPYAQSESIGGNWDPPSPEMWLGADQIGRDLLTRLIYGARMTIGIALATTLLSFTIGITFGLAAAVMGKWVDTLLSRMVDVILSIPLLIFGMIIIGVFGSSIPTLIITIAVLDSTRVFRLARALGMNLVVLEFVEVARLRGEGLWWVISREILPNAAAPLISEFGLRFCFNFLFVAALSFLGLGVQPPYADWGGMVHDNAGAITFGMYAPLYPAAAIALLTVGINLVVDWLLSIDARPSGAQAEM*