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berkeley_reactor_200306_biofilm_scaffold_24940_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(16110..16853)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 247.0
  • Bit_score: 323
  • Evalue 4.60e-86
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 247.0
  • Bit_score: 323
  • Evalue 2.30e-85
tRNA pseudouridine synthase A n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=TRUA_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 247.0
  • Bit_score: 323
  • Evalue 1.60e-85

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Taxonomy

Chelativorans sp. BNC1 → Chelativorans → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGCCCCGCTACAAGCTCCTGATCGAATATGACGGCACGCCCTATGCCGGCTGGCAGCGCCAGGCCAATGGCCGCGCCGTGCAGCAGGTGGTGGAGGAGGCGATCGAGGCTTTCACCGGCGAGGCCCTGCGCATCCAGTGCGCCGGGCGAACCGATGCGGGGGTGCACGCCACCGGCCAGGTCGCCTCGGTGATGCTGGCCAAGGAGTGGCGGACCGACCAGGTGCGCGACGCGCTCAACGCCCACCTCACCCTGATGGAGGAGCAGGTCTCGATCCTGGCGGCGGAAAAGGTGCCGGAGGCGTTCGACGCCCGCTTCTCGGCCAAGGGCCGGCGCTATCTCTACCGCATCATCGACCGCCGCCCGCCGCTGGCGCTGGAGCGGCTGCGCTGCTGGCATTCGCGCAAAGCCCTGGACGCGGACGCCATGCACCGCGCCGCGCAGCGGCTCCTCGGCCATCACGACTTCACCACGTTCCGGGCGGCGGACTGCCAGTCCGACAGCCCGATGAAGACGCTGGACCGGCTGGACGTGGTCCGCCGGGACGGCGAGATCCATGTCGAGGCGGCGGCGCGCTCCTTCCTGCACAACCAGGTGCGCTCGATGGTGGGCTCGCTGAAGCGCGTCGGCGACGGCTCGTGGAGCGAGGCCGACCTCGTGGCGGCGCTGGAGGCGCGCGAGCGGGCGCGCTGCGCCGCCCTGGCGCCGCCGCACGGCCTCTACCTCACCGGGGTGGTGTATTAA
PROTEIN sequence
Length: 248
MPRYKLLIEYDGTPYAGWQRQANGRAVQQVVEEAIEAFTGEALRIQCAGRTDAGVHATGQVASVMLAKEWRTDQVRDALNAHLTLMEEQVSILAAEKVPEAFDARFSAKGRRYLYRIIDRRPPLALERLRCWHSRKALDADAMHRAAQRLLGHHDFTTFRAADCQSDSPMKTLDRLDVVRRDGEIHVEAAARSFLHNQVRSMVGSLKRVGDGSWSEADLVAALEARERARCAALAPPHGLYLTGVVY*